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    Reep5 receptor accessory protein 5 [ Mus musculus (house mouse) ]

    Gene ID: 13476, updated on 5-Mar-2024

    Summary

    Official Symbol
    Reep5provided by MGI
    Official Full Name
    receptor accessory protein 5provided by MGI
    Primary source
    MGI:MGI:1270152
    See related
    Ensembl:ENSMUSG00000005873 AllianceGenome:MGI:1270152
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Dp1; DP1/TB2; TB2/DP1
    Summary
    Located in endoplasmic reticulum tubular network. Is expressed in early conceptus; nervous system; pancreas; and secondary oocyte. Orthologous to human REEP5 (receptor accessory protein 5). [provided by Alliance of Genome Resources, Apr 2022]
    Expression
    Ubiquitous expression in CNS E18 (RPKM 93.0), subcutaneous fat pad adult (RPKM 90.5) and 27 other tissues See more
    Orthologs
    NEW
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    Genomic context

    Location:
    18 B1; 18 18.57 cM
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 18 NC_000084.7 (34477938..34508044, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 18 NC_000084.6 (34344885..34374991, complement)

    Chromosome 18 - NC_000084.7Genomic Context describing neighboring genes Neighboring gene APC, WNT signaling pathway regulator Neighboring gene predicted gene, 54017 Neighboring gene signal recognition particle 19 Neighboring gene STARR-positive B cell enhancer ABC_E8999 Neighboring gene polycystic kidney disease 2-like 2 Neighboring gene SET translocation pseudogene Neighboring gene family with sequence similarity 13, member B Neighboring gene STARR-seq mESC enhancer starr_44201 Neighboring gene STARR-seq mESC enhancer starr_44203 Neighboring gene STARR-seq mESC enhancer starr_44204

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Gene trapped (1) 
    • Endonuclease-mediated (3) 

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    Process Evidence Code Pubs
    involved_in endoplasmic reticulum membrane organization IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in endoplasmic reticulum IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in endoplasmic reticulum ISO
    Inferred from Sequence Orthology
    more info
     
    located_in endoplasmic reticulum tubular network IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in endoplasmic reticulum tubular network ISO
    Inferred from Sequence Orthology
    more info
     
    located_in junctional sarcoplasmic reticulum membrane IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
     
    located_in sarcoplasmic reticulum IEA
    Inferred from Electronic Annotation
    more info
     
    located_in sarcoplasmic reticulum membrane IDA
    Inferred from Direct Assay
    more info
    PubMed 

    General protein information

    Preferred Names
    receptor expression-enhancing protein 5
    Names
    GP106
    deleted in polyposis 1
    polyposis locus protein 1 homolog
    protein TB2 homolog

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_007874.3NP_031900.3  receptor expression-enhancing protein 5

      See identical proteins and their annotated locations for NP_031900.3

      Status: VALIDATED

      Source sequence(s)
      AI842075, AK013146, BU053115
      Consensus CDS
      CCDS50247.1
      UniProtKB/TrEMBL
      G3X8R0, Q5QGU0
      Related
      ENSMUSP00000006027.6, ENSMUST00000006027.7
      Conserved Domains (1) summary
      pfam03134
      Location:55143
      TB2_DP1_HVA22; TB2/DP1, HVA22 family

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000084.7 Reference GRCm39 C57BL/6J

      Range
      34477938..34508044 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_003952491.2 RNA Sequence