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    Cox17 cytochrome c oxidase assembly protein 17, copper chaperone [ Mus musculus (house mouse) ]

    Gene ID: 12856, updated on 5-Mar-2024

    Summary

    Official Symbol
    Cox17provided by MGI
    Official Full Name
    cytochrome c oxidase assembly protein 17, copper chaperoneprovided by MGI
    Primary source
    MGI:MGI:1333806
    See related
    Ensembl:ENSMUSG00000046516 AllianceGenome:MGI:1333806
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Summary
    Enables copper ion binding activity and enzyme activator activity. Predicted to be involved in mitochondrial cytochrome c oxidase assembly; positive regulation of cell population proliferation; and positive regulation of cytochrome-c oxidase activity. Located in mitochondrion. Is expressed in brain; heart; metanephros; and skeletal muscle. Orthologous to human COX17 (cytochrome c oxidase copper chaperone COX17). [provided by Alliance of Genome Resources, Apr 2022]
    Expression
    Ubiquitous expression in liver E14 (RPKM 48.4), placenta adult (RPKM 37.3) and 28 other tissues See more
    Orthologs
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    Genomic context

    Location:
    16 B3; 16 26.77 cM
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 16 NC_000082.7 (38167332..38173125)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 16 NC_000082.6 (38346983..38352763)

    Chromosome 16 - NC_000082.7Genomic Context describing neighboring genes Neighboring gene nuclear receptor subfamily 1, group I, member 2 Neighboring gene cilia and flagella associated protein 91 Neighboring gene STARR-positive B cell enhancer ABC_E9163 Neighboring gene popeye domain containing 2 Neighboring gene CapStarr-seq enhancer MGSCv37_chr16:38400095-38400248 Neighboring gene phospholipase A1 member A Neighboring gene STARR-positive B cell enhancer ABC_E8634

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Targeted (1)  1 citation
    • Endonuclease-mediated (1) 

    Pathways from PubChem

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables copper chaperone activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables copper chaperone activity ISO
    Inferred from Sequence Orthology
    more info
     
    enables copper ion binding IDA
    Inferred from Direct Assay
    more info
    PubMed 
    enables cuprous ion binding ISO
    Inferred from Sequence Orthology
    more info
     
    enables enzyme activator activity IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    enables ion binding ISO
    Inferred from Sequence Orthology
    more info
     
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    located_in cytoplasm ISO
    Inferred from Sequence Orthology
    more info
     
    is_active_in mitochondrial intermembrane space IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in mitochondrial intermembrane space ISO
    Inferred from Sequence Orthology
    more info
     
    located_in mitochondrion HDA PubMed 

    General protein information

    Preferred Names
    cytochrome c oxidase copper chaperone
    Names
    cytochrome c oxidase, subunit XVII assembly protein homolog

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001017429.2NP_001017429.1  cytochrome c oxidase copper chaperone

      See identical proteins and their annotated locations for NP_001017429.1

      Status: VALIDATED

      Source sequence(s)
      BC048668, BG792513
      Consensus CDS
      CCDS28165.1
      UniProtKB/Swiss-Prot
      P56394
      UniProtKB/TrEMBL
      Q3UJM3, Q54AC6
      Related
      ENSMUSP00000054086.9, ENSMUST00000050273.9
      Conserved Domains (1) summary
      pfam05051
      Location:1863
      COX17; Cytochrome C oxidase copper chaperone (COX17)

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000082.7 Reference GRCm39 C57BL/6J

      Range
      38167332..38173125
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006521750.5XP_006521813.1  cytochrome c oxidase copper chaperone isoform X1

      See identical proteins and their annotated locations for XP_006521813.1

      UniProtKB/Swiss-Prot
      P56394
      UniProtKB/TrEMBL
      Q3UJM3, Q54AC6
      Related
      ENSMUSP00000113430.2, ENSMUST00000120495.2
      Conserved Domains (1) summary
      pfam05051
      Location:1863
      COX17; Cytochrome C oxidase copper chaperone (COX17)