U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    Mia MIA SH3 domain containing [ Mus musculus (house mouse) ]

    Gene ID: 12587, updated on 5-Mar-2024

    Summary

    Official Symbol
    Miaprovided by MGI
    Official Full Name
    MIA SH3 domain containingprovided by MGI
    Primary source
    MGI:MGI:109615
    See related
    Ensembl:ENSMUSG00000089661 AllianceGenome:MGI:109615
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Mia1; Cdrap; CD-RAP
    Summary
    Predicted to enable growth factor activity. Acts upstream of or within cell-matrix adhesion and extracellular matrix organization. Predicted to be located in extracellular region. Is expressed in several structures, including articular cartilage; autopod; respiratory system; sensory organ; and skeleton. Orthologous to human MIA (MIA SH3 domain containing). [provided by Alliance of Genome Resources, Apr 2022]
    Expression
    Biased expression in limb E14.5 (RPKM 50.9), genital fat pad adult (RPKM 27.5) and 8 other tissues See more
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Location:
    7 A3; 7 15.84 cM
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 7 NC_000073.7 (26879166..26880574, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 7 NC_000073.6 (27179741..27181149, complement)

    Chromosome 7 - NC_000073.7Genomic Context describing neighboring genes Neighboring gene egl-9 family hypoxia-inducible factor 2 Neighboring gene STARR-positive B cell enhancer mm9_chr7:27952094-27952395 Neighboring gene RAB4B, member RAS oncogene family Neighboring gene STARR-positive B cell enhancers ABC_E1725 and ABC_E288 Neighboring gene microRNA 3101 Neighboring gene small nuclear ribonucleoprotein polypeptide A Neighboring gene STARR-positive B cell enhancer ABC_E3707 Neighboring gene actin maturation protease Neighboring gene microRNA 1191

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)

    Pathways from PubChem

    General gene information

    Markers

    Potential readthrough

    Included gene: Rab4b

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables growth factor activity IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    acts_upstream_of_or_within cell-matrix adhesion IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in extracellular matrix organization IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    acts_upstream_of_or_within extracellular matrix organization IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in extracellular region TAS
    Traceable Author Statement
    more info
    PubMed 

    General protein information

    Preferred Names
    melanoma-derived growth regulatory protein
    Names
    cartilage-derived retinoic acid-sensitive protein
    melanoma inhibitory activity 1
    melanoma inhibitory activity protein

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_019394.3NP_062267.2  melanoma-derived growth regulatory protein precursor

      See identical proteins and their annotated locations for NP_062267.2

      Status: VALIDATED

      Source sequence(s)
      AW047492, BE864464, CK794645
      Consensus CDS
      CCDS21013.1
      UniProtKB/Swiss-Prot
      O09086, P97495, Q61865
      UniProtKB/TrEMBL
      G5E8V2
      Related
      ENSMUSP00000071876.7, ENSMUST00000071986.13
      Conserved Domains (1) summary
      cl17036
      Location:33129
      SH3; Src Homology 3 domain superfamily

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000073.7 Reference GRCm39 C57BL/6J

      Range
      26879166..26880574 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)