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    Ank progressive ankylosis [ Mus musculus (house mouse) ]

    Gene ID: 11732, updated on 18-Apr-2024

    Summary

    Official Symbol
    Ankprovided by MGI
    Official Full Name
    progressive ankylosisprovided by MGI
    Primary source
    MGI:MGI:3045421
    See related
    Ensembl:ENSMUSG00000022265 AllianceGenome:MGI:3045421
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    ank; Ankh; mKIAA1581; D15Ertd221e
    Summary
    Enables inorganic diphosphate transmembrane transporter activity. Acts upstream of or within regulation of bone mineralization. Located in plasma membrane. Is integral component of plasma membrane. Is expressed in several structures, including bone; connective tissue; olfactory epithelium; telencephalon; and vibrissa follicle. Used to study craniometaphyseal dysplasia. Human ortholog(s) of this gene implicated in autosomal dominant craniometaphyseal dysplasia and chondrocalcinosis. Orthologous to human ANKH (ANKH inorganic pyrophosphate transport regulator). [provided by Alliance of Genome Resources, Apr 2022]
    Expression
    Ubiquitous expression in heart adult (RPKM 65.4), cerebellum adult (RPKM 43.1) and 27 other tissues See more
    Orthologs
    NEW
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    Genomic context

    Location:
    15 B1; 15 10.23 cM
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 15 NC_000081.7 (27466763..27594995)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 15 NC_000081.6 (27466677..27594909)

    Chromosome 15 - NC_000081.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 53888 Neighboring gene STARR-seq mESC enhancer starr_38216 Neighboring gene STARR-seq mESC enhancer starr_38217 Neighboring gene STARR-seq mESC enhancer starr_38219 Neighboring gene discs, large homolog-associated protein 5 pseudogene Neighboring gene STARR-seq mESC enhancer starr_38220 Neighboring gene STARR-seq mESC enhancer starr_38221 Neighboring gene STARR-seq mESC enhancer starr_38226 Neighboring gene predicted gene, 29901 Neighboring gene STARR-seq mESC enhancer starr_38227 Neighboring gene STARR-positive B cell enhancer mm9_chr15:27526573-27526874 Neighboring gene microRNA 7117 Neighboring gene STARR-positive B cell enhancer mm9_chr15:27560352-27560653 Neighboring gene OTU deubiquitinase with linear linkage specificity Neighboring gene predicted gene, 46506

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)

    Pathways from PubChem

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Process Evidence Code Pubs
    involved_in ATP export ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in bone mineralization IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in bone mineralization IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in calcium ion homeostasis IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in cementum mineralization IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in cementum mineralization IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in diphosphate metabolic process IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in diphosphate metabolic process IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in gene expression IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in gene expression IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in inhibition of non-skeletal tissue mineralization IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in inhibition of non-skeletal tissue mineralization IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in inorganic diphosphate transport IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in muscle cell cellular homeostasis IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in phosphate ion homeostasis IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in phosphate ion transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
     
    acts_upstream_of_or_within regulation of bone mineralization IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in regulation of bone mineralization IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in response to sodium phosphate IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    Component Evidence Code Pubs
    is_active_in extracellular region IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    located_in membrane IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in membrane ISO
    Inferred from Sequence Orthology
    more info
     
    is_active_in plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in plasma membrane IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in plasma membrane ISO
    Inferred from Sequence Orthology
    more info
     

    General protein information

    Preferred Names
    mineralization regulator ANKH
    Names
    ATP carrier protein ANKH
    fn54 protein
    progressive ankylosis protein
    progressive ankylosis protein homolog

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_020332.4NP_065065.3  mineralization regulator ANKH

      See identical proteins and their annotated locations for NP_065065.3

      Status: VALIDATED

      Source sequence(s)
      AK083135, AW049351, BC054379
      Consensus CDS
      CCDS27402.1
      UniProtKB/Swiss-Prot
      O35138, O35139, Q9JHZ2
      UniProtKB/TrEMBL
      Q3UG85, Q8C438
      Related
      ENSMUSP00000022875.7, ENSMUST00000022875.7
      Conserved Domains (1) summary
      pfam07260
      Location:1345
      ANKH; Progressive ankylosis protein (ANKH)

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000081.7 Reference GRCm39 C57BL/6J

      Range
      27466763..27594995
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)