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    Actl7a actin-like 7a [ Mus musculus (house mouse) ]

    Gene ID: 11470, updated on 11-Apr-2024

    Summary

    Official Symbol
    Actl7aprovided by MGI
    Official Full Name
    actin-like 7aprovided by MGI
    Primary source
    MGI:MGI:1343051
    See related
    Ensembl:ENSMUSG00000070979 AllianceGenome:MGI:1343051
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Tact2
    Summary
    Located in cytoplasm; male germ cell nucleus; and motile cilium. Colocalizes with Golgi apparatus. Human ortholog(s) of this gene implicated in male infertility. Orthologous to human ACTL7A (actin like 7A). [provided by Alliance of Genome Resources, Apr 2022]
    Orthologs
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    Genomic context

    See Actl7a in Genome Data Viewer
    Location:
    4 B3; 4 31.66 cM
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 4 NC_000070.7 (56743422..56744925)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 4 NC_000070.6 (56743422..56744925)

    Chromosome 4 - NC_000070.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 34687 Neighboring gene predicted gene, 52740 Neighboring gene actin-like 7b Neighboring gene elongator complex protein 1 Neighboring gene actin binding transcription modulator Neighboring gene catenin alpha like 1 Neighboring gene STARR-seq mESC enhancer starr_10312 Neighboring gene STARR-positive B cell enhancer ABC_E9083

    Genomic regions, transcripts, and products

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Process Evidence Code Pubs
    involved_in acrosome assembly IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in fertilization IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    acts_upstream_of_or_within single fertilization IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    colocalizes_with Golgi apparatus IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in acrosomal vesicle IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    located_in acrosomal vesicle ISO
    Inferred from Sequence Orthology
    more info
     
    is_active_in actin cytoskeleton IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    is_active_in cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in cytoplasm IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in cytoplasmic vesicle IEA
    Inferred from Electronic Annotation
    more info
     
    located_in cytoskeleton IEA
    Inferred from Electronic Annotation
    more info
     
    located_in male germ cell nucleus IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in motile cilium IDA
    Inferred from Direct Assay
    more info
    PubMed 
    is_active_in nucleus IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    part_of protein-containing complex ISO
    Inferred from Sequence Orthology
    more info
     

    General protein information

    Preferred Names
    actin-like protein 7A
    Names
    T-actin-2
    actin-like Tact2
    actin-like-7-alpha
    t-actin 2
    testis-specific actin-2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_009611.3NP_033741.1  actin-like protein 7A

      See identical proteins and their annotated locations for NP_033741.1

      Status: VALIDATED

      Source sequence(s)
      AB023063, BC049610
      Consensus CDS
      CCDS18197.1
      UniProtKB/Swiss-Prot
      A2AMK4, Q9D9P4, Q9JMI5, Q9QY84
      Related
      ENSMUSP00000092692.5, ENSMUST00000095079.6
      Conserved Domains (3) summary
      smart00268
      Location:74440
      ACTIN; Actin
      pfam16840
      Location:670
      ACTL7A_N; Actin-like protein 7A N-terminus
      cl17037
      Location:72440
      NBD_sugar-kinase_HSP70_actin; Nucleotide-Binding Domain of the sugar kinase/HSP70/actin superfamily

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000070.7 Reference GRCm39 C57BL/6J

      Range
      56743422..56744925
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)