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    5033404E19Rik RIKEN cDNA 5033404E19 gene [ Mus musculus (house mouse) ]

    Gene ID: 114668, updated on 8-Feb-2024

    Summary

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    Official Symbol
    5033404E19Rikprovided by MGI
    Official Full Name
    RIKEN cDNA 5033404E19 geneprovided by MGI
    Gene description
    NSA2 ribosome biogenesis homolog pseudogene
    Primary source
    MGI:MGI:2149700
    See related
    Ensembl:ENSMUSG00000102185 AllianceGenome:MGI:2149700
    Gene type
    pseudo
    RefSeq status
    PROVISIONAL
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
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    Genomic context

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    Location:
    1 H5; 1 89.54 cM
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 1 NC_000067.7 (185229503..185230211)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 1 NC_000067.6 (185497306..185498014)

    Chromosome 1 - NC_000067.7Genomic Context describing neighboring genes Neighboring gene RIKEN cDNA 9630028B13 gene Neighboring gene STARR-seq mESC enhancer starr_03330 Neighboring gene solute carrier family 30, member 10 Neighboring gene predicted gene 2061 Neighboring gene predicted gene, 34969 Neighboring gene STARR-seq mESC enhancer starr_03333 Neighboring gene STARR-seq mESC enhancer starr_03334 Neighboring gene predicted gene, 35023 Neighboring gene STARR-seq mESC enhancer starr_03337 Neighboring gene STARR-seq mESC enhancer starr_03338 Neighboring gene predicted gene 9722

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Antisense transcription in the mammalian transcriptome. Katayama S, et al. Science, 2005 Sep 2. PMID 16141073
    2. High-efficiency full-length cDNA cloning. Carninci P, et al. Methods Enzymol, 1999. PMID 10349636
    3. RIKEN integrated sequence analysis (RISA) system--384-format sequencing pipeline with 384 multicapillary sequencer. Shibata K, et al. Genome Res, 2000 Nov. PMID 11076861, Free PMC Article
    4. Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes. Carninci P, et al. Genome Res, 2000 Oct. PMID 11042159, Free PMC Article
    5. Functional annotation of a full-length mouse cDNA collection. Kawai J, et al. Nature, 2001 Feb 8. PMID 11217851

    See all (7) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Other Names

    • NSA2 ribosome biogenesis homolog pseudogene

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_033600.1 RNA Sequence

      Status: PROVISIONAL

      Source sequence(s)
      AC131980
      Related
      ENSMUST00000192616.2

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000067.7 Reference GRCm39 C57BL/6J

      Range
      185229503..185230211
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

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