Slc25a41 solute carrier family 25, member 41 [Mus musculus (house mouse)] - Gene

Summary

Official Symbol: Slc25a41provided by MGI
Official Full Name: solute carrier family 25, member 41provided by MGI
Primary source: MGI:MGI:2144215
See related: Ensembl:ENSMUSG00000011486 AllianceGenome:MGI:2144215
Gene type: protein coding
RefSeq status: VALIDATED
Organism: Mus musculus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as: SCaMC-3L; 4933406J04Rik
Summary: Enables ADP transmembrane transporter activity and ATP transmembrane transporter activity. Involved in mitochondrial ADP transmembrane transport and mitochondrial ATP transmembrane transport. Located in mitochondrion. Orthologous to human SLC25A41 (solute carrier family 25 member 41). [provided by Alliance of Genome Resources, Apr 2022]
Expression: Biased expression in testis adult (RPKM 9.3), ovary adult (RPKM 3.9) and 12 other tissues See more
Orthologs: human all
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Genomic context

Location:: 17 D; 17 29.63 cM

Exon count:: 8

Annotation release	Status	Assembly	Chr	Location
RS_2024_02	current	GRCm39 (GCF_000001635.27)	17	NC_000083.7 (57339772..57348654, complement)
108.20200622	previous assembly	GRCm38.p6 (GCF_000001635.26)	17	NC_000083.6 (57032772..57041654, complement)

Chromosome 17 - NC_000083.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Expression

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See details

Project title: Mouse ENCODE transcriptome data
Description: RNA profiling data sets generated by the Mouse ENCODE project.
BioProject: PRJNA66167
Publication: PMID 25409824
Analysis date: n/a

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

mouse SCaMC-3L shows a limited expression pattern; it is preferentially expressed in testis and, at lower levels, in brain
Title: Characterization of SCaMC-3-like/slc25a41, a novel calcium-independent mitochondrial ATP-Mg/Pi carrier.

Submit: New GeneRIF Correction

Variation

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Alleles

Alleles of this type are documented at Mouse Genome Informatics (MGI)

Endonuclease-mediated (1) 1 citation

General gene information

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Markers

NoName (e-PCR)
- UniSTS:237675

AI507137 (e-PCR)
- UniSTS:165799

NoName (e-PCR)
- UniSTS:547057

Slc25a41 (e-PCR), detects polymorphism
- UniSTS:547057

NoName (e-PCR)
- UniSTS:488186

Gene Ontology Provided by MGI

Function	Evidence Code	Pubs
enables ADP transmembrane transporter activity	IMP Inferred from Mutant Phenotype more info	PubMed
enables ATP transmembrane transporter activity	IBA Inferred from Biological aspect of Ancestor more info
enables ATP transmembrane transporter activity	IMP Inferred from Mutant Phenotype more info	PubMed

Process	Evidence Code	Pubs
involved_in ADP transport	IBA Inferred from Biological aspect of Ancestor more info
involved_in ADP transport	IMP Inferred from Mutant Phenotype more info	PubMed
involved_in ATP transport	IBA Inferred from Biological aspect of Ancestor more info
involved_in ATP transport	IMP Inferred from Mutant Phenotype more info	PubMed
involved_in mitochondrial ADP transmembrane transport	IMP Inferred from Mutant Phenotype more info	PubMed
involved_in mitochondrial ATP transmembrane transport	IMP Inferred from Mutant Phenotype more info	PubMed
involved_in transmembrane transport	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
located_in membrane	IEA Inferred from Electronic Annotation more info
located_in mitochondrial inner membrane	IEA Inferred from Electronic Annotation more info
located_in mitochondrion	HDA more info	PubMed
located_in mitochondrion	IDA Inferred from Direct Assay more info	PubMed

General protein information

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Preferred Names: calcium-independent mitochondrial carrier protein SCaMC-3L

Names: SCaMC-3-like; mitochondrial ATP-Mg/Pi carrier protein; mitochondrial ATP-Mg/Pi carrier protein SLC25A41; small calcium-binding mitochondrial carrier protein 3-like

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001346527.1 → NP_001333456.1 calcium-independent mitochondrial carrier protein SCaMC-3L isoform 2

Status: VALIDATED

Source sequence(s)

CT571247

Consensus CDS

CCDS84326.1

UniProtKB/Swiss-Prot

Q8BVN7

Related

ENSMUSP00000130857.2, ENSMUST00000169012.2
NM_175333.3 → NP_780542.1 calcium-independent mitochondrial carrier protein SCaMC-3L isoform 1

See identical proteins and their annotated locations for NP_780542.1

Status: VALIDATED

Source sequence(s)

AK077111, BX637138

Consensus CDS

CCDS37668.1

UniProtKB/Swiss-Prot

B8ZHC8, Q14BV4, Q8BVN7

Related

ENSMUSP00000058877.8, ENSMUST00000058661.14

Conserved Domains (2) summary

PTZ00169
Location:23 → 305

PTZ00169; ADP/ATP transporter on adenylate translocase; Provisional

pfam00153
Location:25 → 116

Mito_carr; Mitochondrial carrier protein