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    Trbv5 T cell receptor beta, variable 5 [ Mus musculus (house mouse) ]

    Gene ID: 100124661, updated on 8-Feb-2024

    Summary

    Official Symbol
    Trbv5provided by MGI
    Official Full Name
    T cell receptor beta, variable 5provided by MGI
    Primary source
    MGI:MGI:98583
    See related
    Ensembl:ENSMUSG00000076465 IMGT/GENE-DB:TRBV5; AllianceGenome:MGI:98583
    Gene type
    other
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Tcrb-V1
    Summary
    Predicted to be involved in cell surface receptor signaling pathway. Predicted to be active in plasma membrane. Orthologous to human TRBV4-1 (T cell receptor beta variable 4-1) and TRBV4-2 (T cell receptor beta variable 4-2). [provided by Alliance of Genome Resources, Apr 2022]
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    Genomic context

    Location:
    6 19.13 cM; 6 B1
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 6 NC_000072.7 (41039293..41039737)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 6 NC_000072.6 (41062359..41062803)

    Chromosome 6 - NC_000072.7Genomic Context describing neighboring genes Neighboring gene T cell receptor beta chain Neighboring gene STARR-positive B cell enhancer mm9_chr6:41005535-41005835 Neighboring gene T cell receptor beta, variable 3 Neighboring gene T cell receptor beta, variable 10 Neighboring gene T cell receptor beta variable 6 Neighboring gene T cell receptor beta variable 7

    Genomic regions, transcripts, and products

    General gene information

    Other Names

    • T-cell receptor beta, variable 1

    Gene Ontology Provided by MGI

    Process Evidence Code Pubs
    involved_in cell surface receptor signaling pathway IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Component Evidence Code Pubs
    is_active_in plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    Genomic

    1. NG_006980.1 

      Range
      171565..172009
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000072.7 Reference GRCm39 C57BL/6J

      Range
      41039293..41039737
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)