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    Tmem35b transmembrane protein 35B [ Mus musculus (house mouse) ]

    Gene ID: 100039968, updated on 8-Mar-2024

    Summary

    Official Symbol
    Tmem35bprovided by MGI
    Official Full Name
    transmembrane protein 35Bprovided by MGI
    Primary source
    MGI:MGI:3758095
    See related
    Ensembl:ENSMUSG00000070737 AllianceGenome:MGI:3758095
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Gm12942; Zmym6nb
    Summary
    Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to human TMEM35B (transmembrane protein 35B). [provided by Alliance of Genome Resources, Apr 2022]
    Expression
    Ubiquitous expression in kidney adult (RPKM 9.8), bladder adult (RPKM 9.1) and 28 other tissues See more
    Orthologs
    NEW
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    Try the new Transcript table

    Genomic context

    Location:
    4 D2.2; 4 61.29 cM
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 4 NC_000070.7 (127019836..127023453)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 4 NC_000070.6 (127126043..127129660)

    Chromosome 4 - NC_000070.7Genomic Context describing neighboring genes Neighboring gene STARR-positive B cell enhancer ABC_E9012 Neighboring gene STARR-seq mESC enhancer starr_11419 Neighboring gene zinc finger, MYM domain containing 1 Neighboring gene 60S ribosomal protein L21 pseudogene Neighboring gene STARR-seq mESC enhancer starr_11420 Neighboring gene zinc finger, MYM-type 6 Neighboring gene predicted gene, 25600 Neighboring gene STARR-seq mESC enhancer starr_11421 Neighboring gene STARR-seq mESC enhancer starr_11422 Neighboring gene 40S ribosomal protein S28 pseudogene Neighboring gene STARR-seq mESC enhancer starr_11423 Neighboring gene DLG associated protein 3 Neighboring gene STARR-seq mESC enhancer starr_11425 Neighboring gene STARR-seq mESC enhancer starr_11428 Neighboring gene predicted gene, 52707

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (2) 

    General gene information

    Markers

    Potential readthrough

    Included gene: Zmym6

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
     
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    transmembrane protein 35B
    Names
    ZMYM6 neighbor protein

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001099319.2NP_001092789.1  transmembrane protein 35B precursor

      See identical proteins and their annotated locations for NP_001092789.1

      Status: VALIDATED

      Source sequence(s)
      AL606985
      Consensus CDS
      CCDS38882.1
      UniProtKB/Swiss-Prot
      A2A7U4, Q3U0Y2
      UniProtKB/TrEMBL
      A2A7U3
      Related
      ENSMUSP00000092302.5, ENSMUST00000094712.5

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000070.7 Reference GRCm39 C57BL/6J

      Range
      127019836..127023453
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)