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    Gm2629 predicted gene 2629 [ Mus musculus (house mouse) ]

    Gene ID: 100040151, updated on 8-Feb-2024

    Summary

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    Official Symbol
    Gm2629provided by MGI
    Official Full Name
    predicted gene 2629provided by MGI
    Gene description
    aldehyde dehydrogenase 9, subfamily A1 pseudogene
    Primary source
    MGI:MGI:3780797
    See related
    AllianceGenome:MGI:3780797
    Gene type
    pseudo
    RefSeq status
    INFERRED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
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    Genomic context

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    Location:
    18 A1; 18 8.45 cM
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 18 NC_000084.7 (15346157..15347321)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 18 NC_000084.6 (15213100..15214264)

    Chromosome 18 - NC_000084.7Genomic Context describing neighboring genes Neighboring gene RIKEN cDNA 4933424G05 gene Neighboring gene potassium channel tetramerisation domain containing 1 Neighboring gene mitochondrial ribosomal protein L27, pseudogene Neighboring gene STARR-seq mESC enhancer starr_43881 Neighboring gene STARR-seq mESC enhancer starr_43882 Neighboring gene STARR-seq mESC enhancer starr_43883 Neighboring gene predicted gene, 57822 Neighboring gene STARR-seq mESC enhancer starr_43885 Neighboring gene predicted gene, 41672 Neighboring gene CapStarr-seq enhancer MGSCv37_chr18:15471265-15471418 Neighboring gene CapStarr-seq enhancer MGSCv37_chr18:15490295-15490483 Neighboring gene STARR-seq mESC enhancer starr_43886 Neighboring gene predicted gene, 30230

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Antisense transcription in the mammalian transcriptome. Katayama S, et al. Science, 2005 Sep 2. PMID 16141073
    2. High-efficiency full-length cDNA cloning. Carninci P, et al. Methods Enzymol, 1999. PMID 10349636
    3. RIKEN integrated sequence analysis (RISA) system--384-format sequencing pipeline with 384 multicapillary sequencer. Shibata K, et al. Genome Res, 2000 Nov. PMID 11076861, Free PMC Article
    4. Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes. Carninci P, et al. Genome Res, 2000 Oct. PMID 11042159, Free PMC Article
    5. Functional annotation of a full-length mouse cDNA collection. Kawai J, et al. Nature, 2001 Feb 8. PMID 11217851

    See all (7) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Other Names

    • aldehyde dehydrogenase 9, subfamily A1 pseudogene

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    Genomic

    1. NG_028570.1 

      Range
      101..1265
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000084.7 Reference GRCm39 C57BL/6J

      Range
      15346157..15347321
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

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