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    LOC100131041 FKBP prolyl isomerase 7 pseudogene [ Homo sapiens (human) ]

    Gene ID: 100131041, updated on 10-Oct-2023

    Summary

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    Gene symbol
    LOC100131041
    Gene description
    FKBP prolyl isomerase 7 pseudogene
    See related
    Ensembl:ENSG00000217231
    Gene type
    pseudo
    RefSeq status
    INFERRED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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    Genomic context

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    Location:
    6q24.2
    Annotation release Status Assembly Chr Location
    RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 6 NC_000006.12 (144036501..144037765)
    RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 6 NC_060930.1 (145229220..145230486)
    105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 6 NC_000006.11 (144357638..144358902)

    Chromosome 6 - NC_000006.12Genomic Context describing neighboring genes Neighboring gene MPRA-validated peak6180 silencer Neighboring gene MPRA-validated peak6181 silencer Neighboring gene zinc finger C2HC-type containing 1B Neighboring gene ATAC-STARR-seq lymphoblastoid active region 25207 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr6:144279682-144280240 Neighboring gene PLAG1 like zinc finger 1 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr6:144285771-144286284 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr6:144293958-144294542 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr6:144294543-144295127 Neighboring gene ReSE screen-validated silencer GRCh37_chr6:144328825-144329007 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 17633 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 17632 Neighboring gene hydatidiform mole associated and imprinted Neighboring gene ATAC-STARR-seq lymphoblastoid active region 25208 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 25209 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 17634 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 17635 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 17636 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 25210 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 17637 Neighboring gene ReSE screen-validated silencer GRCh37_chr6:144410739-144410950 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 25211 Neighboring gene uncharacterized LOC105378036 Neighboring gene splicing factor 3b subunit 5

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    Phenotypes

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    Review eQTL and phenotype association data in this region using PheGenI

    Variation

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    See studies and variants in dbVar

    See Variation Viewer (GRCh37.p13)

    See Variation Viewer (GRCh38)

    General gene information

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    Markers

    Other Names

    • FK506 binding protein 7 pseudogene

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    Genomic

    1. NG_017147.2 

      Range
      101..1365
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000006.12 Reference GRCh38.p14 Primary Assembly

      Range
      144036501..144037765
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060930.1 Alternate T2T-CHM13v2.0

      Range
      145229220..145230486
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version

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