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4930469K13Rik RIKEN cDNA 4930469K13 gene [ Mus musculus (house mouse) ]

Gene ID: 76874, updated on 8-Feb-2024

Summary

Official Symbol
4930469K13Rikprovided by MGI
Official Full Name
RIKEN cDNA 4930469K13 geneprovided by MGI
Primary source
MGI:MGI:1924124
See related
Ensembl:ENSMUSG00000085684 AllianceGenome:MGI:1924124
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Expression
Broad expression in spleen adult (RPKM 1.5), liver E18 (RPKM 1.3) and 22 other tissues See more
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Genomic context

Location:
11 A4; 11 19.33 cM
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 11 NC_000077.7 (33923961..34048554, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 11 NC_000077.6 (33973961..34098554, complement)

Chromosome 11 - NC_000077.7Genomic Context describing neighboring genes Neighboring gene Kv channel-interacting protein 1 Neighboring gene STARR-positive B cell enhancer ABC_E8390 Neighboring gene CapStarr-seq enhancer MGSCv37_chr11:33838922-33839284 Neighboring gene predicted gene, 36395 Neighboring gene CapStarr-seq enhancer MGSCv37_chr11:33908807-33908990 Neighboring gene potassium large conductance calcium-activated channel, subfamily M, beta member 1 Neighboring gene predicted gene, 51857 Neighboring gene predicted gene, 53680 Neighboring gene STARR-seq mESC enhancer starr_29140 Neighboring gene CapStarr-seq enhancer MGSCv37_chr11:33964098-33964329 Neighboring gene lymphocyte cytosolic protein 2 Neighboring gene predicted gene 12121 Neighboring gene forkhead box I1

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

General gene information

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_155520.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AK015529, AL645909
    Related
    ENSMUST00000141450.2

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000077.7 Reference GRCm39 C57BL/6J

    Range
    33923961..34048554 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)