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Hoxb5os homeobox B5 and homeobox B6, opposite strand [ Mus musculus (house mouse) ]

Gene ID: 75395, updated on 5-Mar-2024

Summary

Official Symbol
Hoxb5osprovided by MGI
Official Full Name
homeobox B5 and homeobox B6, opposite strandprovided by MGI
Primary source
MGI:MGI:1922645
See related
Ensembl:ENSMUSG00000085645 AllianceGenome:MGI:1922645
Gene type
ncRNA
RefSeq status
PREDICTED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Hoxb5/6as; 0610040B09Rik
Summary
Enables histone binding activity. Part of histone methyltransferase complex. Is expressed in early tubule; late tubule; and renal vasculature. [provided by Alliance of Genome Resources, Apr 2022]
Expression
Biased expression in kidney adult (RPKM 11.8), adrenal adult (RPKM 11.5) and 10 other tissues See more
Orthologs
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Genomic context

See Hoxb5os in Genome Data Viewer
Location:
11 D; 11 59.82 cM
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 11 NC_000077.7 (96181863..96197736, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 11 NC_000077.6 (96291037..96306910, complement)

Chromosome 11 - NC_000077.7Genomic Context describing neighboring genes Neighboring gene homeobox B8 Neighboring gene STARR-seq mESC enhancer starr_30545 Neighboring gene homeobox B7 Neighboring gene homeobox B6 Neighboring gene homeobox B5 Neighboring gene homeobox B3 Neighboring gene Hoxb locus associated lincRNA Neighboring gene microRNA 10a Neighboring gene homeobox B4

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_131758.1 RNA Sequence

    Status: PREDICTED

    Source sequence(s)
    AK002860
    Related
    ENSMUST00000150698.3

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000077.7 Reference GRCm39 C57BL/6J

    Range
    96181863..96197736 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)