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4930505A04Rik RIKEN cDNA 4930505A04 gene [ Mus musculus (house mouse) ]

Gene ID: 75087, updated on 5-Mar-2024

Summary

Official Symbol
4930505A04Rikprovided by MGI
Official Full Name
RIKEN cDNA 4930505A04 geneprovided by MGI
Primary source
MGI:MGI:1922337
See related
Ensembl:ENSMUSG00000040919 AllianceGenome:MGI:1922337
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Summary
Is expressed in ductus deferens; oviduct; prostate gland; testis; and vascular system. Orthologous to human C2orf73 (chromosome 2 open reading frame 73). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Restricted expression toward testis adult (RPKM 31.7) See more
Orthologs
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Genomic context

Location:
11 A4; 11 17.93 cM
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 11 NC_000077.7 (30376006..30421829, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 11 NC_000077.6 (30426006..30471829, complement)

Chromosome 11 - NC_000077.7Genomic Context describing neighboring genes Neighboring gene STARR-seq mESC enhancer starr_29057 Neighboring gene predicted gene, 40820 Neighboring gene STARR-seq mESC enhancer starr_29058 Neighboring gene stress-induced phosphoprotein 1 pseudogene Neighboring gene STARR-seq mESC enhancer starr_29059 Neighboring gene predicted gene, 53677 Neighboring gene STARR-seq mESC enhancer starr_29061 Neighboring gene acylphosphatase 2, muscle type Neighboring gene proteasome (prosome, macropain) 26S subunit, non-ATPase, 14 pseudogene Neighboring gene Pea15a pseudogene

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Targeted (2) 

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
 

General protein information

Preferred Names
uncharacterized protein C2orf73 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001100394.1NP_001093864.1  uncharacterized protein C2orf73 homolog

    See identical proteins and their annotated locations for NP_001093864.1

    Status: VALIDATED

    Source sequence(s)
    AK015698, BC049719
    Consensus CDS
    CCDS48764.1
    UniProtKB/Swiss-Prot
    Q5SPV6, Q810N4, Q9D580
    Related
    ENSMUSP00000045288.8, ENSMUST00000041763.14
    Conserved Domains (1) summary
    pfam15667
    Location:46233
    GDWWSH; Protein of unknown function with motif GDWWSH

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000077.7 Reference GRCm39 C57BL/6J

    Range
    30376006..30421829 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)