ASGR1 asialoglycoprotein receptor 1 [Pan troglodytes (chimpanzee)] - Gene

Summary

Official Symbol: ASGR1provided by VGNC
Official Full Name: asialoglycoprotein receptor 1provided by VGNC
Primary source: VGNC:VGNC:6357
Locus tag: CK820_G0036841
See related: Ensembl:ENSPTRG00000008662
Gene type: protein coding
RefSeq status: MODEL
Organism: Pan troglodytes
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs: human all
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Genomic context

Location:: chromosome: 17

Exon count:: 9

Annotation release	Status	Assembly	Chr	Location
RS_2024_02	current	NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2)	19	NC_072417.2 (17683523..17689523, complement)
RS_2023_04	previous assembly	NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1)	17	NC_072415.1 (15923019..15929242, complement)

Chromosome 19 - NC_072417.2 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Go to reference sequence details

Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Markers

RH11640 (e-PCR)
- UniSTS:83984

ASGR1_8213 (e-PCR)
- UniSTS:468294

D17S2010 (e-PCR)
- UniSTS:68829

Homology

NCBI Orthologs

Orthologs from OrthoDB

Gene Ontology Provided by RefSeq

Function	Evidence Code	Pubs
enables signaling receptor activity	IEA Inferred from Electronic Annotation more info	PubMed

General protein information

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Preferred Names: asialoglycoprotein receptor 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

NC_072417.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Range

17683523..17689523 complement

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_016931396.4 → XP_016786885.1 asialoglycoprotein receptor 1 isoform X2

UniProtKB/TrEMBL

A0A2I3SYV9, A0A2J8KPZ1, A0A6D2XI91

Related

ENSPTRP00000082137.1

Conserved Domains (2) summary

cd03590
Location:115 → 240

CLECT_DC-SIGN_like; C-type lectin-like domain (CTLD) of the type found in human dendritic cell (DC)-specific intercellular adhesion molecule 3-grabbing non-integrin (DC-SIGN) and the related receptor, DC-SIGN receptor (DC-SIGNR)

pfam03954
Location:23 → 105

Lectin_N; Hepatic lectin, N-terminal domain
XM_016931394.4 → XP_016786883.1 asialoglycoprotein receptor 1 isoform X1

UniProtKB/TrEMBL

A0A2J8KQ01, A0A6D2YA63, H2QC22

Conserved Domains (2) summary

cd03590
Location:154 → 279

CLECT_DC-SIGN_like; C-type lectin-like domain (CTLD) of the type found in human dendritic cell (DC)-specific intercellular adhesion molecule 3-grabbing non-integrin (DC-SIGN) and the related receptor, DC-SIGN receptor (DC-SIGNR)

pfam03954
Location:17 → 144

Lectin_N; Hepatic lectin, N-terminal domain
XM_016931395.4 → XP_016786884.1 asialoglycoprotein receptor 1 isoform X1

UniProtKB/TrEMBL

A0A2J8KQ01, A0A6D2YA63, H2QC22

Related

ENSPTRP00000014772.3

Conserved Domains (2) summary

cd03590
Location:154 → 279

CLECT_DC-SIGN_like; C-type lectin-like domain (CTLD) of the type found in human dendritic cell (DC)-specific intercellular adhesion molecule 3-grabbing non-integrin (DC-SIGN) and the related receptor, DC-SIGN receptor (DC-SIGNR)

pfam03954
Location:17 → 144

Lectin_N; Hepatic lectin, N-terminal domain