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Ccdc182 coiled-coil domain containing 182 [ Mus musculus (house mouse) ]

Gene ID: 74297, updated on 5-Mar-2024

Summary

Official Symbol
Ccdc182provided by MGI
Official Full Name
coiled-coil domain containing 182provided by MGI
Primary source
MGI:MGI:1921547
See related
Ensembl:ENSMUSG00000034031 AllianceGenome:MGI:1921547
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
1700106J16Rik
Summary
Acts upstream of or within female gonad development. Is expressed in central nervous system; reproductive system; and urinary system. Orthologous to human CCDC182 (coiled-coil domain containing 182). [provided by Alliance of Genome Resources, Apr 2022]
Orthologs
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Genomic context

Location:
11 C; 11 52.4 cM
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 11 NC_000077.7 (88184869..88186087)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 11 NC_000077.6 (88294043..88295261)

Chromosome 11 - NC_000077.7Genomic Context describing neighboring genes Neighboring gene CapStarr-seq enhancer MGSCv37_chr11:88047672-88047825 Neighboring gene STARR-positive B cell enhancer ABC_E7041 Neighboring gene predicted gene, 38534 Neighboring gene VISTA enhancer mm439 Neighboring gene predicted gene, 34366 Neighboring gene microRNA 378b Neighboring gene musashi RNA-binding protein 2 Neighboring gene STARR-seq mESC enhancer starr_30328 Neighboring gene predicted gene 11510

Genomic regions, transcripts, and products

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Endonuclease-mediated (4) 

General gene information

Markers

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
involved_in female gonad development IEP
Inferred from Expression Pattern
more info
PubMed 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
 

General protein information

Preferred Names
coiled-coil domain-containing protein 182
Names
coiled-coil domain-containing protein ENSP00000299415 homolog
novel tropomyosin domain containing protein

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_028859.1NP_083135.1  coiled-coil domain-containing protein 182

    See identical proteins and their annotated locations for NP_083135.1

    Status: VALIDATED

    Source sequence(s)
    AK007129, AK137123, AL929089
    Consensus CDS
    CCDS48881.1
    UniProtKB/Swiss-Prot
    Q9D9C6
    Related
    ENSMUSP00000036503.5, ENSMUST00000037268.6
    Conserved Domains (1) summary
    pfam15835
    Location:1139
    DUF4715; Domain of unknown function (DUF4715)

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000077.7 Reference GRCm39 C57BL/6J

    Range
    88184869..88186087
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)