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ASTL astacin like metalloendopeptidase [ Pan troglodytes (chimpanzee) ]

Gene ID: 741606, updated on 29-Mar-2024

Summary

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Official Symbol
ASTLprovided by VGNC
Official Full Name
astacin like metalloendopeptidaseprovided by VGNC
Primary source
VGNC:VGNC:48962
Locus tag
CK820_G0051171
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 2A
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 12 NC_072410.2 (26933188..26948931)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 2A NC_072399.1 (95547791..95565812, complement)

Chromosome 12 - NC_072410.2Genomic Context describing neighboring genes Neighboring gene StAR related lipid transfer domain containing 7 Neighboring gene dual specificity phosphatase 2 Neighboring gene adrenoceptor alpha 2B Neighboring gene glycerol-3-phosphate acyltransferase 2, mitochondrial

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables metalloendopeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in proteolysis IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
astacin-like metalloendopeptidase
Names
astacin-like metalloendopeptidase (M12 family)
XP_054534588.1
XP_054534589.1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_072410.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    26933188..26948931
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054678614.2 → XP_054534589.1  astacin-like metalloendopeptidase isoform X2

    UniProtKB/TrEMBL
    A0A2J8PY07, A0A6D2VVX0, H2QIC4

  2. XM_054678613.2 → XP_054534588.1  astacin-like metalloendopeptidase isoform X1

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases
Research Materials
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