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ALDH2 aldehyde dehydrogenase 2 family member [ Sus scrofa (pig) ]

Gene ID: 733685, updated on 5-Mar-2024

Summary

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Official Symbol
ALDH2provided by VGNC
Official Full Name
aldehyde dehydrogenase 2 family memberprovided by VGNC
Primary source
VGNC:VGNC:106442
See related
Ensembl:ENSSSCG00000009889
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Sus scrofa
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Suina; Suidae; Sus
Expression
Broad expression in liver (RPKM 367.3), mixtures (RPKM 181.7) and 6 other tissues See more
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 14
Exon count:
13
Annotation release Status Assembly Chr Location
106 current Sscrofa11.1 (GCF_000003025.6) 14 NC_010456.5 (39902317..39933113, complement)
105 previous assembly Sscrofa10.2 (GCF_000003025.5) 14 NC_010456.4 (42378891..42409676, complement)

Chromosome 14 - NC_010456.5Genomic Context describing neighboring genes Neighboring gene disintegrin and metalloproteinase domain-containing protein 1a-like Neighboring gene MAPK activated protein kinase 5 Neighboring gene laforin-like Neighboring gene BICD family like cargo adaptor 1 Neighboring gene RAB35, member RAS oncogene family Neighboring gene GCN1 activator of EIF2AK4

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Transcriptome data used for gene annotation
  • Description: Nine kinds of tissues and a mixture of multiple tissues were sequenced for genome annotation
  • BioProject: PRJNA311523
  • Publication: PMID 27646534
  • Analysis date: Thu Dec 14 17:10:49 2017

Bibliography

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Related articles in PubMed

  1. PEDE (Pig EST Data Explorer): construction of a database for ESTs derived from porcine full-length cDNA libraries. Uenishi H, et al. Nucleic Acids Res, 2004 Jan 1. PMID 14681463, Free PMC Article

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables aldehyde dehydrogenase (NAD+) activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
aldehyde dehydrogenase, mitochondrial
Names
ALDH class 2
ALDH-E2
aldehyde dehydrogenase 2 family (mitochondrial)
mitochondrial aldehyde dehydrogenase 2
NP_001038076.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001044611.2 → NP_001038076.1  aldehyde dehydrogenase, mitochondrial precursor

    See identical proteins and their annotated locations for NP_001038076.1

    Status: PROVISIONAL

    Source sequence(s)
    DQ266356
    UniProtKB/Swiss-Prot
    Q2XQV4
    UniProtKB/TrEMBL
    A0A8D1TH00, B2ZF47
    Related
    ENSSSCP00000053451.1, ENSSSCT00000055390.2
    Conserved Domains (2) summary
    cd07141
    Location:35 → 515
    ALDH_F1AB_F2_RALDH1; NAD+-dependent retinal dehydrogenase 1, ALDH families 1A, 1B, and 2-like
    PLN02466
    Location:18 → 520
    PLN02466; aldehyde dehydrogenase family 2 member

RefSeqs of Annotated Genomes: Sus scrofa Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Sscrofa11.1 Primary Assembly

Genomic

  1. NC_010456.5 Reference Sscrofa11.1 Primary Assembly

    Range
    39902317..39933113 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q2XQV4.1 GenPept UniProtKB/Swiss-Prot:Q2XQV4

Gene LinkOut

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