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ATF5 activating transcription factor 5 [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 719150, updated on 5-Mar-2024

Summary

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Official Symbol
ATF5provided by VGNC
Official Full Name
activating transcription factor 5provided by VGNC
Primary source
VGNC:VGNC:108472
See related
Ensembl:ENSMMUG00000054473
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 19
Exon count:
4
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 19 NC_041772.1 (49909193..49914681)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 19 NC_027911.1 (45353422..45358910)

Chromosome 19 - NC_041772.1Genomic Context describing neighboring genes Neighboring gene AKT1 substrate 1 Neighboring gene TBC1 domain family member 17 Neighboring gene interleukin 4 induced 1 Neighboring gene nucleoporin 62 Neighboring gene small nucleolar RNA U3 Neighboring gene sialic acid binding Ig like lectin 11 Neighboring gene sialic acid binding Ig like lectin 16

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription activator activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II transcription regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cyclic AMP-dependent transcription factor ATF-5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041772.1 Reference Mmul_10 Primary Assembly

    Range
    49909193..49914681
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001115871.4 → XP_001115871.2  cyclic AMP-dependent transcription factor ATF-5

    UniProtKB/TrEMBL
    A0A5F7ZTA1
    Related
    ENSMMUP00000068884.1, ENSMMUT00000095480.1
    Conserved Domains (1) summary
    cd14692
    Location:214 → 276
    bZIP_ATF4; Basic leucine zipper (bZIP) domain of Activating Transcription Factor-4 (ATF-4) and similar proteins: a DNA-binding and dimerization domain

  2. XM_015124627.2 → XP_014980113.2  cyclic AMP-dependent transcription factor ATF-5

    UniProtKB/TrEMBL
    A0A5F7ZTA1
    Related
    ENSMMUP00000069519.1, ENSMMUT00000081755.1
    Conserved Domains (1) summary
    cd14692
    Location:214 → 276
    bZIP_ATF4; Basic leucine zipper (bZIP) domain of Activating Transcription Factor-4 (ATF-4) and similar proteins: a DNA-binding and dimerization domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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