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ZSCAN30 zinc finger and SCAN domain containing 30 [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 708199, updated on 5-Mar-2024

Summary

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Official Symbol
ZSCAN30provided by VGNC
Official Full Name
zinc finger and SCAN domain containing 30provided by VGNC
Primary source
VGNC:VGNC:79933
See related
Ensembl:ENSMMUG00000062080
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Also known as
ZNF397OS
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 18
Exon count:
5
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 18 NC_041771.1 (47217538..47253513)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 18 NC_027910.1 (23956617..23992503, complement)

Chromosome 18 - NC_041771.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC106994480 Neighboring gene zinc finger protein 396 Neighboring gene zinc finger protein 24 Neighboring gene zinc finger protein 271 Neighboring gene proline-rich protein 36-like Neighboring gene uncharacterized LOC114673697 Neighboring gene uncharacterized LOC106994479 Neighboring gene zinc finger protein 397

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger and SCAN domain-containing protein 30
Names
zinc finger protein 397 opposite strand

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041771.1 Reference Mmul_10 Primary Assembly

    Range
    47217538..47253513
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001104028.4 → XP_001104028.1  zinc finger and SCAN domain-containing protein 30

    See identical proteins and their annotated locations for XP_001104028.1

    UniProtKB/TrEMBL
    A0A5F7Z7C0
    Conserved Domains (4) summary
    COG5048
    Location:217 → 458
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:329 → 349
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam13465
    Location:453 → 478
    zf-H2C2_2; Zinc-finger double domain
    cl02605
    Location:44 → 154
    SCAN; SCAN oligomerization domain

  2. XM_002800906.3 → XP_002800952.1  zinc finger and SCAN domain-containing protein 30

    See identical proteins and their annotated locations for XP_002800952.1

    UniProtKB/TrEMBL
    A0A5F7Z7C0
    Related
    ENSMMUP00000061314.1, ENSMMUT00000092776.1
    Conserved Domains (4) summary
    COG5048
    Location:217 → 458
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:329 → 349
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam13465
    Location:453 → 478
    zf-H2C2_2; Zinc-finger double domain
    cl02605
    Location:44 → 154
    SCAN; SCAN oligomerization domain

RNA

  1. XR_003724481.1 RNA Sequence

Nucleotide Protein
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