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ARFIP1 ADP ribosylation factor interacting protein 1 [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 697533, updated on 5-Mar-2024

Summary

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Official Symbol
ARFIP1provided by VGNC
Official Full Name
ADP ribosylation factor interacting protein 1provided by VGNC
Primary source
VGNC:VGNC:69878
Locus tag
EGK_16162
See related
Ensembl:ENSMMUG00000018490
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 5
Exon count:
11
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 5 NC_041758.1 (150414332..150535899)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 5 NC_027897.1 (152685750..152700396) , (152741962..152820941)

Chromosome 5 - NC_041758.1Genomic Context describing neighboring genes Neighboring gene transmembrane protein 154 Neighboring gene ribosome biogenesis protein NSA2 homolog pseudogene Neighboring gene tigger transposable element derived 4 Neighboring gene PSME3-interacting protein pseudogene Neighboring gene FH2 domain containing 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phospholipid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein domain specific binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in intracellular protein transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of Arp2/3 complex-mediated actin nucleation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in trans-Golgi network membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
arfaptin-1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001266175.1 → NP_001253104.1  arfaptin-1

    See identical proteins and their annotated locations for NP_001253104.1

    Status: PROVISIONAL

    Source sequence(s)
    JU334008
    UniProtKB/TrEMBL
    A0A8J8Y071, G7MS50, H9FT04
    Related
    ENSMMUP00000024331.3, ENSMMUT00000026002.3
    Conserved Domains (1) summary
    cd07660
    Location:155 → 355
    BAR_Arfaptin; The Bin/Amphiphysin/Rvs (BAR) domain of Arfaptin

RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041758.1 Reference Mmul_10 Primary Assembly

    Range
    150414332..150535899
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028847992.1 → XP_028703825.1  arfaptin-1 isoform X2

    UniProtKB/TrEMBL
    A0A5F7ZY85, F6X0L5
    Related
    ENSMMUP00000070622.1, ENSMMUT00000088179.1
    Conserved Domains (1) summary
    cd07660
    Location:123 → 323
    BAR_Arfaptin; The Bin/Amphiphysin/Rvs (BAR) domain of Arfaptin

  2. XM_028847991.1 → XP_028703824.1  arfaptin-1 isoform X1

    Conserved Domains (1) summary
    cd07660
    Location:152 → 352
    BAR_Arfaptin; The Bin/Amphiphysin/Rvs (BAR) domain of Arfaptin

  3. XM_028847993.1 → XP_028703826.1  arfaptin-1 isoform X3

    Conserved Domains (1) summary
    cd07660
    Location:34 → 234
    BAR_Arfaptin; The Bin/Amphiphysin/Rvs (BAR) domain of Arfaptin
Nucleotide Protein
Heading Accession and Version

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