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2300009A05Rik RIKEN cDNA 2300009A05 gene [ Mus musculus (house mouse) ]

Gene ID: 69478, updated on 5-Mar-2024

Summary

Official Symbol
2300009A05Rikprovided by MGI
Official Full Name
RIKEN cDNA 2300009A05 geneprovided by MGI
Primary source
MGI:MGI:1916728
See related
Ensembl:ENSMUSG00000032403 AllianceGenome:MGI:1916728
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Summary
Predicted to be located in extracellular region. Orthologous to human C15orf61 (chromosome 15 open reading frame 61). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Broad expression in adrenal adult (RPKM 204.6), ovary adult (RPKM 79.4) and 18 other tissues See more
Orthologs
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Genomic context

Location:
9 C; 9 34.06 cM
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 9 NC_000075.7 (63301729..63306526, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 9 NC_000075.6 (63394447..63399244, complement)

Chromosome 9 - NC_000075.7Genomic Context describing neighboring genes Neighboring gene SKI family transcriptional corepressor 1 Neighboring gene mitogen-activated protein kinase kinase 5 Neighboring gene predicted gene, 39355 Neighboring gene STARR-positive B cell enhancer ABC_E5077 Neighboring gene STARR-positive B cell enhancer mm9_chr9:63247761-63248062 Neighboring gene predicted gene, 16759 Neighboring gene IQ motif containing H Neighboring gene predicted gene, 25995 Neighboring gene DnaJ (Hsp40) homolog, subfamily C, member 17 pseudogene

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Endonuclease-mediated (2) 

General gene information

Markers

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
 
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
uncharacterized protein C15orf61 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_027090.1NP_081366.1  uncharacterized protein C15orf61 homolog precursor

    See identical proteins and their annotated locations for NP_081366.1

    Status: VALIDATED

    Source sequence(s)
    AK009046, AK158428, BY090300
    Consensus CDS
    CCDS52830.1
    UniProtKB/Swiss-Prot
    Q0VG49, Q3TYQ8
    Related
    ENSMUSP00000127596.2, ENSMUST00000168665.3
    Conserved Domains (1) summary
    pfam15031
    Location:29154
    DUF4528; Domain of unknown function (DUF4528)

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000075.7 Reference GRCm39 C57BL/6J

    Range
    63301729..63306526 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)