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Tmem258b transmembrane protein 258 B [ Rattus norvegicus (Norway rat) ]

Gene ID: 686092, updated on 13-Apr-2024

Summary

Official Symbol
Tmem258bprovided by RGD
Official Full Name
transmembrane protein 258 Bprovided by RGD
Primary source
RGD:1586604
See related
Ensembl:ENSRNOG00000032740 AllianceGenome:RGD:1586604
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as
Tmem258
Summary
Predicted to be involved in protein N-linked glycosylation. Predicted to be integral component of membrane. Predicted to be part of protein-containing complex. Predicted to be active in membrane-bounded organelle. Orthologous to human TMEM258 (transmembrane protein 258). [provided by Alliance of Genome Resources, Apr 2022]
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Genomic context

See Tmem258b in Genome Data Viewer
Location:
9q31
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 9 NC_086027.1 (63944801..63945183)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 9 NC_051344.1 (56450373..56450755)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 9 NC_005108.4 (61552336..61552716)

Chromosome 9 - NC_086027.1Genomic Context describing neighboring genes Neighboring gene post-GPI attachment to proteins inositol deacylase 1 Neighboring gene ankyrin repeat domain 44 Neighboring gene uncharacterized LOC108351932 Neighboring gene ribosomal protein L11, pseudogene 6 Neighboring gene splicing factor 3b, subunit 1

Genomic regions, transcripts, and products

General gene information

Markers

Gene Ontology Provided by RGD

Process Evidence Code Pubs
involved_in protein N-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
is_active_in membrane-bounded organelle IBA
Inferred from Biological aspect of Ancestor
more info
 
part_of oligosaccharyltransferase I complex IEA
Inferred from Electronic Annotation
more info
 
part_of protein-containing complex IBA
Inferred from Biological aspect of Ancestor
more info
 

General protein information

Preferred Names
transmembrane protein 258 B

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001408694.1NP_001395623.1  transmembrane protein 258 B

    Status: VALIDATED

    Source sequence(s)
    JAXUCZ010000009
    UniProtKB/TrEMBL
    D3ZS52
    Related
    ENSRNOP00000051028.2, ENSRNOT00000050090.4

RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086027.1 Reference GRCr8

    Range
    63944801..63945183
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)