2310057M21Rik RIKEN cDNA 2310057M21 gene [Mus musculus (house mouse)] - Gene

Summary

Official Symbol: 2310057M21Rikprovided by MGI
Official Full Name: RIKEN cDNA 2310057M21 geneprovided by MGI
Primary source: MGI:MGI:1915527
See related: Ensembl:ENSMUSG00000040177 AllianceGenome:MGI:1915527
Gene type: protein coding
RefSeq status: VALIDATED
Organism: Mus musculus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as: PAAT; 3110040E10Rik
Summary: Enables identical protein binding activity. Predicted to be located in mitochondrion. Is expressed in sensory organ; skeleton; and tarsus. Orthologous to human C10orf88 (chromosome 10 open reading frame 88). [provided by Alliance of Genome Resources, Apr 2022]
Expression: Ubiquitous expression in placenta adult (RPKM 2.4), CNS E18 (RPKM 2.0) and 28 other tissues See more
Orthologs: human all
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Genomic context

Location:: 7 F3; 7 73.88 cM

Exon count:: 7

Annotation release	Status	Assembly	Chr	Location
RS_2024_02	current	GRCm39 (GCF_000001635.27)	7	NC_000073.7 (130943340..130964570, complement)
108.20200622	previous assembly	GRCm38.p6 (GCF_000001635.26)	7	NC_000073.6 (131340862..131362843, complement)

Chromosome 7 - NC_000073.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Expression

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See details

Project title: Mouse ENCODE transcriptome data
Description: RNA profiling data sets generated by the Mouse ENCODE project.
BioProject: PRJNA66167
Publication: PMID 25409824
Analysis date: n/a

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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Variation

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Alleles

Alleles of this type are documented at Mouse Genome Informatics (MGI)

Endonuclease-mediated (2)

General gene information

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Markers

NoName (e-PCR)
- UniSTS:235792

D10Mit157.2 (e-PCR), detects polymorphism
- UniSTS:126061

AI429544 (e-PCR)
- UniSTS:165562

Gene Ontology Provided by MGI

Function	Evidence Code	Pubs
enables ATP hydrolysis activity	ISO Inferred from Sequence Orthology more info
enables hydrolase activity	IEA Inferred from Electronic Annotation more info
enables identical protein binding	IPI Inferred from Physical Interaction more info	PubMed

Process	Evidence Code	Pubs
involved_in biological_process	ND No biological Data available more info

Component	Evidence Code	Pubs
located_in cytoplasm	ISO Inferred from Sequence Orthology more info
located_in mitochondrion	ISO Inferred from Sequence Orthology more info

General protein information

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Preferred Names: ATPase PAAT

Names: protein associated with ABC transporters; uncharacterized protein C10orf88 homolog

NP_080931.1

EC 3.6.1.3

XP_011240190.1

EC 3.6.1.3

XP_030098811.1

EC 3.6.1.3

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.