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Acf ATP-dependent chromatin assembly factor large subunit [ Tribolium castaneum (red flour beetle) ]

Gene ID: 660079, updated on 10-May-2024

Summary

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Gene symbol
Acf
Gene description
ATP-dependent chromatin assembly factor large subunit
Locus tag
TcasGA2_TC030765
Gene type
protein coding
RefSeq status
MODEL
Organism
Tribolium castaneum
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Coleoptera; Polyphaga; Cucujiformia; Tenebrionidae; Tenebrionidae incertae sedis; Tribolium
Orthologs
fruit fly all
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Genomic context

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Location:
chromosome: 3
Exon count:
10
Annotation release Status Assembly Chr Location
RS_2024_04 current icTriCast1.1 (GCF_031307605.1) 3 NC_087396.1 (20815365..20821730, complement)
103 previous assembly Tcas5.2 (GCF_000002335.3) Linkage Group LG7 NC_007422.5 (3931020..3937316)

Chromosome 3 - NC_087396.1Genomic Context describing neighboring genes Neighboring gene fibrous sheath-interacting protein 1 Neighboring gene uncharacterized protein C15orf41 homolog Neighboring gene RNA polymerase III subunit F Neighboring gene mitochondrial ribosomal protein L40 Neighboring gene Alg12 alpha-1,6-mannosyltransferase Neighboring gene cytochrome c oxidase subunit 7A1, mitochondrial

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chromatin remodeling IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of DNA replication IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of heterochromatin formation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of CHRAC IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nuclear chromosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
bromodomain adjacent to zinc finger domain protein 1A
Names
AUGUSTUS-3.0.2_30765
GLEAN_15889-OG769

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_031307605.1-RS_2024_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference icTriCast1.1 Primary Assembly

Genomic

  1. NC_087396.1 Reference icTriCast1.1 Primary Assembly

    Range
    20815365..20821730 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008201957.3 → XP_008200179.2  bromodomain adjacent to zinc finger domain protein 1A isoform X2

  2. XM_008201956.3 → XP_008200178.2  bromodomain adjacent to zinc finger domain protein 1A isoform X1

Nucleotide Protein Strain
Heading Accession and Version

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