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APP-BP1 beta-Amyloid precursor protein binding protein 1 [ Tribolium castaneum (red flour beetle) ]

Gene ID: 657871, updated on 12-Apr-2024

Summary

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Gene symbol
APP-BP1
Gene description
beta-Amyloid precursor protein binding protein 1
Locus tag
TcasGA2_TC003419
Gene type
protein coding
RefSeq status
MODEL
Organism
Tribolium castaneum
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Coleoptera; Polyphaga; Cucujiformia; Tenebrionidae; Tenebrionidae incertae sedis; Tribolium
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Genomic context

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Location:
chromosome: 1
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2024_04 current icTriCast1.1 (GCF_031307605.1) 1 NC_087394.1 (31701595..31704364, complement)
103 previous assembly Tcas5.2 (GCF_000002335.3) Linkage Group LG3 NC_007418.3 (4802026..4804798)

Chromosome 1 - NC_087394.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC103312311 Neighboring gene differentially expressed in FDCP 8 homolog Neighboring gene muscle M-line assembly protein unc-89 Neighboring gene zinc finger protein 239 Neighboring gene RAB11-binding protein RELCH homolog Neighboring gene D-amino acid oxidase 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. BeetleBase in 2010: revisions to provide comprehensive genomic information for Tribolium castaneum. Kim HS, et al. Nucleic Acids Res, 2010 Jan. PMID 19820115, Free PMC Article
  2. The genome of the model beetle and pest Tribolium castaneum. Tribolium Genome Sequencing Consortium, et al. Nature, 2008 Apr 24. PMID 18362917

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables NEDD8 activating enzyme activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein neddylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
nedd8-activating enzyme E1 regulatory subunit
Names
AUGUSTUS-3.0.2_03419
GLEAN_03419
Nedd8-activating enzyme E1 regulatory subunit-like Protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_031307605.1-RS_2024_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference icTriCast1.1 Primary Assembly

Genomic

  1. NC_087394.1 Reference icTriCast1.1 Primary Assembly

    Range
    31701595..31704364 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_964301.4 → XP_969394.1  nedd8-activating enzyme E1 regulatory subunit

    See identical proteins and their annotated locations for XP_969394.1

    UniProtKB/TrEMBL
    D6WGG4
    Conserved Domains (2) summary
    COG0476
    Location:17 → 193
    ThiF; Molybdopterin or thiamine biosynthesis adenylyltransferase [Coenzyme transport and metabolism]
    cd01493
    Location:16 → 531
    APPBP1_RUB; Ubiquitin activating enzyme (E1) subunit APPBP1. APPBP1 is part of the heterodimeric activating enzyme (E1), specific for the Rub family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to ...
Nucleotide Protein Strain
Heading Accession and Version

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