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BCYRN1P3 brain cytoplasmic RNA 1, pseudogene 3 [ Homo sapiens (human) ]

Gene ID: 654337, updated on 10-Oct-2023

Summary

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Official Symbol
BCYRN1P3provided by HGNC
Official Full Name
brain cytoplasmic RNA 1, pseudogene 3provided by HGNC
Primary source
HGNC:HGNC:39833
See related
AllianceGenome:HGNC:39833
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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See BCYRN1P3 in Genome Data Viewer
Location:
13q11
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 13 NC_000013.11 (18709709..18709902, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 13 NC_060937.1 (17923713..17923910, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 13 NC_000013.10 (19283849..19284042, complement)

Chromosome 13 - NC_000013.11Genomic Context describing neighboring genes Neighboring gene TERF1 pseudogene 5 Neighboring gene family with sequence similarity 207 member B, pseudogene Neighboring gene MPRA-validated peak2058 silencer Neighboring gene MPRA-validated peak2059 silencer Neighboring gene GXYLT1 pseudogene 1 Neighboring gene calponin 2 pseudogene 12

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. BC200 RNA: a neural RNA polymerase III product encoded by a monomeric Alu element. Martignetti JA, et al. Proc Natl Acad Sci U S A, 1993 Dec 15. PMID 8265590, Free PMC Article

GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See Variation Viewer (GRCh37.p13)

General gene information

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NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_005375.3 

    Range
    101..294
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    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000013.11 Reference GRCh38.p14 Primary Assembly

    Range
    18709709..18709902 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Reference GRCh38.p14 ALT_REF_LOCI_1

Genomic

  1. NT_187594.1 Reference GRCh38.p14 ALT_REF_LOCI_1

    Range
    11359..11552 complement
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    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060937.1 Alternate T2T-CHM13v2.0

    Range
    17923713..17923910 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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