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PKMP1 pyruvate kinase M1/2 pseudogene 1 [ Homo sapiens (human) ]

Gene ID: 643586, updated on 10-Oct-2023

Summary

Official Symbol
PKMP1provided by HGNC
Official Full Name
pyruvate kinase M1/2 pseudogene 1provided by HGNC
Primary source
HGNC:HGNC:44243
See related
AllianceGenome:HGNC:44243
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

See PKMP1 in Genome Data Viewer
Location:
1p13.2
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 1 NC_000001.11 (114535907..114537459)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 1 NC_060925.1 (114547364..114548916)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 1 NC_000001.10 (115078528..115080080)

Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene tripartite motif containing 33 Neighboring gene NANOG-H3K27ac hESC enhancer GRCh37_chr1:115020350-115020850 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 1545 Neighboring gene eukaryotic translation initiation factor 2 subunit 2 beta pseudogene 5 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 1219 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 1220 Neighboring gene uncharacterized LOC124904348 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 1546 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:115055021-115055783 Neighboring gene uncharacterized LOC105378914 Neighboring gene BCAS2 pre-mRNA processing factor Neighboring gene DENN domain containing 2C

Genomic regions, transcripts, and products

Phenotypes

EBI GWAS Catalog

Description
Common genetic variants on 1p13.2 associate with risk of autism.
EBI GWAS Catalog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_022800.4 

    Range
    101..1653
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    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000001.11 Reference GRCh38.p14 Primary Assembly

    Range
    114535907..114537459
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060925.1 Alternate T2T-CHM13v2.0

    Range
    114547364..114548916
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)