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ANKLE1 ankyrin repeat and LEM domain containing 1 [ Canis lupus familiaris (dog) ]

Gene ID: 610155, updated on 5-Mar-2024

Summary

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Official Symbol
ANKLE1provided by VGNC
Official Full Name
ankyrin repeat and LEM domain containing 1provided by VGNC
Primary source
VGNC:VGNC:37875
See related
Ensembl:ENSCAFG00845028449
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Also known as
ANKRD41
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 20
Exon count:
9
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 20 NC_051824.1 (45947346..45951623, complement)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 20 NC_006602.4 (45374282..45378573, complement)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 20 NC_049241.1 (45869631..45873928, complement)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 20 NC_049280.1 (45183987..45188261, complement)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 20 NC_049761.1 (45593769..45598070, complement)

Chromosome 20 - NC_051824.1Genomic Context describing neighboring genes Neighboring gene anoctamin 8 Neighboring gene DET1 and DDB1 associated 1 Neighboring gene abhydrolase domain containing 8 Neighboring gene mitochondrial ribosomal protein L34 Neighboring gene BRISC and BRCA1 A complex member 1 Neighboring gene USH1 protein network component harmonin binding protein 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables endonuclease activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ankyrin repeat and LEM domain-containing protein 1
Names
ankyrin repeat domain 41

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051824.1 Reference ROS_Cfam_1.0

    Range
    45947346..45951623 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038426638.1 → XP_038282566.1  ankyrin repeat and LEM domain-containing protein 1

    UniProtKB/TrEMBL
    A0A8C0SQN7, A0A8I3QGK4
    Related
    ENSCAFP00845039368.1, ENSCAFT00845050211.1
    Conserved Domains (5) summary
    PTZ00322
    Location:62 → 128
    PTZ00322; 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
    cd10454
    Location:477 → 589
    GIY-YIG_COG3680_Meta; GIY-YIG domain of hypothetical proteins from Metazoa
    sd00045
    Location:75 → 106
    ANK; ANK repeat [structural motif]
    pfam12796
    Location:12 → 106
    Ank_2; Ankyrin repeats (3 copies)
    cl02649
    Location:388 → 422
    LEM; LEM (Lap2/Emerin/Man1) domain found in emerin, lamina-associated polypeptide 2 (LAP2), inner nuclear membrane protein Man1 and similar proteins

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049280.1 Alternate UMICH_Zoey_3.1

    Range
    45183987..45188261 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038504947.1 → XP_038360875.1  ankyrin repeat and LEM domain-containing protein 1

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049761.1 Alternate UNSW_CanFamBas_1.0

    Range
    45593769..45598070 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038629476.1 → XP_038485404.1  ankyrin repeat and LEM domain-containing protein 1

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049241.1 Alternate UU_Cfam_GSD_1.0

    Range
    45869631..45873928 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038565361.1 → XP_038421289.1  ankyrin repeat and LEM domain-containing protein 1

    UniProtKB/TrEMBL
    A0A8C0SQN7

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006602.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    45374282..45378573 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038455333.1 → XP_038311261.1  ankyrin repeat and LEM domain-containing protein 1

    UniProtKB/TrEMBL
    A0A8C0NMU3, A0A8C0QYI4, A0A8P0SJR2
    Conserved Domains (4) summary
    cd10454
    Location:475 → 587
    GIY-YIG_COG3680_Meta; GIY-YIG domain of hypothetical proteins from Metazoa
    sd00045
    Location:75 → 106
    ANK; ANK repeat [structural motif]
    pfam12796
    Location:56 → 130
    Ank_2; Ankyrin repeats (3 copies)
    cl02649
    Location:386 → 420
    LEM; LEM (Lap2/Emerin/Man1) domain found in emerin, lamina-associated polypeptide 2 (LAP2), inner nuclear membrane protein Man1 and similar proteins
Nucleotide Protein
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