hspe1 heat shock 10 protein 1 [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: hspe1provided by ZNC
Official Full Name: heat shock 10 protein 1provided by ZNC
Primary source: ZFIN:ZDB-GENE-000906-2
See related: Ensembl:ENSDARG00000056167 AllianceGenome:ZFIN:ZDB-GENE-000906-2
Gene type: protein coding
RefSeq status: VALIDATED
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as: HSP10; cpn10; zgc:86747
Summary: Predicted to enable chaperone binding activity; metal ion binding activity; and unfolded protein binding activity. Predicted to be involved in chaperone cofactor-dependent protein refolding. Predicted to act upstream of or within protein folding. Predicted to be active in mitochondrial matrix. Is expressed in several structures, including alar plate midbrain region; digestive system; midbrain; pectoral fin; and segmental plate. Orthologous to human HSPE1 (heat shock protein family E (Hsp10) member 1). [provided by Alliance of Genome Resources, Apr 2022]
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 9

Exon count:: 6

Annotation release	Status	Assembly	Chr	Location
106	current	GRCz11 (GCF_000002035.6)	9	NC_007120.7 (32301017..32305007)
105	previous assembly	GRCz10 (GCF_000002035.5)	9	NC_007120.6 (32490271..32494261)

Chromosome 9 - NC_007120.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Expression

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See details

Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
BioProject: PRJEB1986
Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

cloning, expression and genomic organization
Title: Expression and genomic organization of the zebrafish chaperonin gene complex.

Submit: New GeneRIF Correction

General gene information

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Gene Ontology Provided by ZFIN

Function	Evidence Code	Pubs
enables ATP binding	IEA Inferred from Electronic Annotation more info
enables metal ion binding	IBA Inferred from Biological aspect of Ancestor more info
enables protein folding chaperone	IEA Inferred from Electronic Annotation more info
enables protein-folding chaperone binding	IBA Inferred from Biological aspect of Ancestor more info
enables unfolded protein binding	IBA Inferred from Biological aspect of Ancestor more info

Process	Evidence Code	Pubs
involved_in chaperone cofactor-dependent protein refolding	IBA Inferred from Biological aspect of Ancestor more info
acts_upstream_of_or_within protein folding	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
is_active_in mitochondrial matrix	IBA Inferred from Biological aspect of Ancestor more info

General protein information

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Preferred Names: 10 kDa heat shock protein, mitochondrial

Names: heat shock 10kD protein 1 (chaperonin 10)

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001328390.1 → NP_001315319.1 10 kDa heat shock protein, mitochondrial isoform 1

Status: VALIDATED

Source sequence(s)

BX530407, EH445965, EH471834, EH546702

UniProtKB/TrEMBL

A0A8M1PA86, Q6IQI7

Related

ENSDARP00000118521.1, ENSDART00000143103.3

Conserved Domains (1) summary

cd00320
Location:6 → 98

cpn10; Chaperonin 10 Kd subunit (cpn10 or GroES); Cpn10 cooperates with chaperonin 60 (cpn60 or GroEL), an ATPase, to assist the folding and assembly of proteins and is found in eubacterial cytosol, as well as in the matrix of mitochondria and chloroplasts. It ...
NM_001328391.1 → NP_001315320.1 10 kDa heat shock protein, mitochondrial isoform 2

Status: VALIDATED

Source sequence(s)

BX530407, EH434761, EH445965, EH471834, EH546702

UniProtKB/TrEMBL

A0A8M1P931, F6NVJ1

Related

ENSDARP00000073069.3, ENSDART00000078608.5

Conserved Domains (1) summary

cd00320
Location:5 → 97

cpn10; Chaperonin 10 Kd subunit (cpn10 or GroES); Cpn10 cooperates with chaperonin 60 (cpn60 or GroEL), an ATPase, to assist the folding and assembly of proteins and is found in eubacterial cytosol, as well as in the matrix of mitochondria and chloroplasts. It ...
NM_131526.2 → NP_571601.1 10 kDa heat shock protein, mitochondrial isoform 1

See identical proteins and their annotated locations for NP_571601.1

Status: VALIDATED

Source sequence(s)

BX530407, EH445965, EH471834, EH546702

UniProtKB/TrEMBL

A0A8M1PA86, Q6IQI7

Related

ENSDARP00000108249.2, ENSDART00000127916.4

Conserved Domains (1) summary

cd00320
Location:6 → 98

cpn10; Chaperonin 10 Kd subunit (cpn10 or GroES); Cpn10 cooperates with chaperonin 60 (cpn60 or GroEL), an ATPase, to assist the folding and assembly of proteins and is found in eubacterial cytosol, as well as in the matrix of mitochondria and chloroplasts. It ...