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CG34316 [ Drosophila melanogaster (fruit fly) ]

Gene ID: 5740757, updated on 11-Apr-2024

Summary

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Official Symbol
CG34316provided by FlyBase
Primary source
FLYBASE:FBgn0085345
Locus tag
Dmel_CG34316
See related
AllianceGenome:FB:FBgn0085345
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
Dmel\CG34316; Dm_3R:60797; JHBP
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Genomic context

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See CG34316 in Genome Data Viewer
Location:
88E3-88E3; 3-56 cM
Exon count:
4
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (15230585..15231686)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (11056307..11057408)

Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene Arginine methyltransferase 3 Neighboring gene antisense RNA:CR43471 Neighboring gene mitochondrial ribosomal protein S10 Neighboring gene telomere fusion Neighboring gene Heat shock protein 70 cognate 4

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A set of structural features defines the cis-regulatory modules of antenna-expressed genes in Drosophila melanogaster. López Y, et al. PLoS One, 2014. PMID 25153327, Free PMC Article
  2. First transcriptome profiling of D. melanogaster after development in a deep underground low radiation background laboratory. Zarubin M, et al. PLoS One, 2021. PMID 34351964, Free PMC Article
  3. Transcriptomic analysis of inbreeding depression in cold-sensitive Drosophila melanogaster shows upregulation of the immune response. Vermeulen CJ, et al. J Evol Biol, 2013 Sep. PMID 23944235
  4. mRNA-Associated Processes and Their Influence on Exon-Intron Structure in Drosophila melanogaster. Lepennetier G, et al. G3 (Bethesda), 2016 Jun 1. PMID 27172210, Free PMC Article
  5. High-fidelity promoter profiling reveals widespread alternative promoter usage and transposon-driven developmental gene expression. Batut P, et al. Genome Res, 2013 Jan. PMID 22936248, Free PMC Article

See all (20) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by FlyBase

Process Evidence Code Pubs
involved_in multicellular organismal reproductive process IBA
Inferred from Biological aspect of Ancestor
more info
  
Component Evidence Code Pubs
is_active_in extracellular space IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
uncharacterized protein
Names
CG34316-PA

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033777.3 Reference assembly

    Range
    15230585..15231686
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001104328.2 → NP_001097798.1  uncharacterized protein Dmel_CG34316 [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001097798.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A1A6X9, A2VET7
    Conserved Domains (1) summary
    cl12117
    Location:32 → 231
    JHBP; Haemolymph juvenile hormone binding protein (JHBP)
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
A1A6X9 A1A6X9

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

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