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cdc37l1 cell division cycle 37-like 1 [ Danio rerio (zebrafish) ]

Gene ID: 569357, updated on 27-Mar-2024

Summary

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Official Symbol
cdc37l1provided by ZNC
Official Full Name
cell division cycle 37-like 1provided by ZNC
Primary source
ZFIN:ZDB-GENE-030131-8865
See related
Ensembl:ENSDARG00000044265 AllianceGenome:ZFIN:ZDB-GENE-030131-8865
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
im:7139934; wu:fa92d07; wu:fk28f10; zgc:171475
Summary
Predicted to enable chaperone binding activity; heat shock protein binding activity; and unfolded protein binding activity. Predicted to be involved in protein folding and protein stabilization. Predicted to be active in cytoplasm. Orthologous to human CDC37L1 (cell division cycle 37 like 1). [provided by Alliance of Genome Resources, Apr 2022]
Orthologs
all
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Genomic context

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Location:
chromosome: 10
Exon count:
8
Annotation release Status Assembly Chr Location
106 current GRCz11 (GCF_000002035.6) 10 NC_007121.7 (10972795..10997564)
105 previous assembly GRCz10 (GCF_000002035.5) 10 NC_007121.6 (11014557..11039326)

Chromosome 10 - NC_007121.7Genomic Context describing neighboring genes Neighboring gene NOTCH regulated ankyrin repeat protein a Neighboring gene exonuclease 3'-5' domain containing 3 Neighboring gene adenylate kinase 3 Neighboring gene UDP-glucose ceramide glucosyltransferase

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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Related articles in PubMed

  1. Characterization of the POU5F1 Homologue in Nile Tilapia: From Expression Pattern to Biological Activity. Xiaohuan H, et al. Stem Cells Dev, 2016 Sep 15. PMID 27473876
  2. RFX transcription factors are essential for hearing in mice. Elkon R, et al. Nat Commun, 2015 Oct 15. PMID 26469318, Free PMC Article
  3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article
  4. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article
  5. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by ZFIN

Function Evidence Code Pubs
enables heat shock protein binding IBA
Inferred from Biological aspect of Ancestor
more info
  
enables protein-folding chaperone binding IBA
Inferred from Biological aspect of Ancestor
more info
  
enables unfolded protein binding IBA
Inferred from Biological aspect of Ancestor
more info
  
Process Evidence Code Pubs
involved_in protein folding IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in protein stabilization IBA
Inferred from Biological aspect of Ancestor
more info
  
Component Evidence Code Pubs
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
  
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
hsp90 co-chaperone Cdc37-like 1
Names
CDC37 cell division cycle 37 homolog-like 1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001109826.2 → NP_001103296.2  hsp90 co-chaperone Cdc37-like 1

    Status: VALIDATED

    Source sequence(s)
    BC152570
    UniProtKB/Swiss-Prot
    A7YY97
    UniProtKB/TrEMBL
    F1QVZ5
    Related
    ENSDARP00000110971.2, ENSDART00000127331.3
    Conserved Domains (2) summary
    smart01069
    Location:265 → 335
    CDC37_C; Cdc37 C terminal domain
    smart01070
    Location:113 → 258
    CDC37_M; Cdc37 Hsp90 binding domain

RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007121.7 Reference GRCz11 Primary Assembly

    Range
    10972795..10997564
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
A7YY97.1 GenPept UniProtKB/Swiss-Prot:A7YY97

Gene LinkOut

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