U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC556989 myosin-IIIb [ Danio rerio (zebrafish) ]

Gene ID: 556989, updated on 27-Mar-2024

Summary

Gene symbol
LOC556989
Gene description
myosin-IIIb
See related
Ensembl:ENSDARG00000058946
Gene type
protein coding
RefSeq status
MODEL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Orthologs
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Location:
chromosome: 10
Exon count:
30
Annotation release Status Assembly Chr Location
106 current GRCz11 (GCF_000002035.6) 10 NC_007121.7 (2600739..2669206)
105 previous assembly GRCz10 (GCF_000002035.5) 10 NC_007121.6 (2572864..2641607)

Chromosome 10 - NC_007121.7Genomic Context describing neighboring genes Neighboring gene nucleoredoxin like 2 Neighboring gene tissue factor pathway inhibitor-like Neighboring gene chemokine (C-C motif) ligand 27b Neighboring gene pyridoxal (pyridoxine, vitamin B6) phosphatase

Genomic regions, transcripts, and products

Expression

  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007121.7 Reference GRCz11 Primary Assembly

    Range
    2600739..2669206
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005172588.4XP_005172645.1  myosin-IIIb isoform X2

    UniProtKB/TrEMBL
    A0A8M2BJU2
    Conserved Domains (3) summary
    smart00242
    Location:34711
    MYSc; Myosin. Large ATPases
    cd14889
    Location:53711
    MYSc_Myo28; class XXVIII myosin, motor domain
    cl15255
    Location:895992
    SH2; Src homology 2 (SH2) domain
  2. XM_679943.7XP_685035.4  myosin-IIIb isoform X1

    UniProtKB/TrEMBL
    A0A8N7T6I8
    Related
    ENSDARP00000091785.5, ENSDART00000101012.6
    Conserved Domains (3) summary
    smart00242
    Location:34711
    MYSc; Myosin. Large ATPases
    cd14889
    Location:53711
    MYSc_Myo28; class XXVIII myosin, motor domain
    cl15255
    Location:895992
    SH2; Src homology 2 (SH2) domain