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LOC555502 uncharacterized LOC555502 [ Danio rerio (zebrafish) ]

Gene ID: 555502, updated on 27-Mar-2024

Summary

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Gene symbol
LOC555502
Gene description
uncharacterized LOC555502
See related
Ensembl:ENSDARG00000095907
Gene type
protein coding
RefSeq status
MODEL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
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Genomic context

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Location:
chromosome: 22
Exon count:
7
Annotation release Status Assembly Chr Location
106 current GRCz11 (GCF_000002035.6) 22 NC_007133.7 (6300064..6316980, complement)
105 previous assembly GRCz10 (GCF_000002035.5) 22 NC_007133.6 (6269933..6287108, complement)

Chromosome 22 - NC_007133.7Genomic Context describing neighboring genes Neighboring gene si:ch211-274k16.9 Neighboring gene ribonuclease like 2 Neighboring gene uncharacterized LOC108181187 Neighboring gene T-cell surface antigen CD2-like Neighboring gene zgc:113298 Neighboring gene si:rp71-1i20.2 Neighboring gene uncharacterized LOC101882933

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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GeneRIFs: Gene References Into Functions

General protein information

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Preferred Names
uncharacterized protein LOC555502

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007133.7 Reference GRCz11 Primary Assembly

    Range
    6300064..6316980 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_678027.8 → XP_683119.4  uncharacterized protein LOC555502 isoform X1

    UniProtKB/TrEMBL
    A0A8N7TEE6
    Related
    ENSDART00000149652.2
    Conserved Domains (2) summary
    smart00410
    Location:151 → 253
    IG_like; Immunoglobulin like
    cl11960
    Location:40 → 142
    Ig; Immunoglobulin domain

  2. XM_021469539.1 → XP_021325214.1  uncharacterized protein LOC555502 isoform X2

    UniProtKB/TrEMBL
    A0A8M9PK26
    Conserved Domains (1) summary
    cl11960
    Location:110 → 208
    Ig; Immunoglobulin domain

RNA

  1. XR_002456460.1 RNA Sequence

Nucleotide Protein Strain
Heading Accession and Version

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