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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001113225.2 → NP_001106696.2 ligand of Numb protein X 2a
Status: VALIDATED
- Source sequence(s)
-
BG305543, BX571696, DT867995, EB950577, EB957408, EH583415, FJ156085
- UniProtKB/TrEMBL
- A0A8M1NFK9, B6DRF5, F1R5N4
- Related
- ENSDARP00000046210.5, ENSDART00000046211.8
- Conserved Domains (3) summary
-
- smart00228
Location:267 → 353
- PDZ; Domain present in PSD-95, Dlg, and ZO-1/2
- cd00992
Location:646 → 730
- PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
- pfam13639
Location:49 → 87
- zf-RING_2; Ring finger domain
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCz11 Primary Assembly
Genomic
-
NC_007135.7 Reference GRCz11 Primary Assembly
- Range
-
21646264..21674999 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_021470169.1 → XP_021325844.1 ligand of Numb protein X 2 isoform X1
- UniProtKB/TrEMBL
- A0A8M9PLS6, B6DRF5
- Conserved Domains (1) summary
-
- cd00992
Location:537 → 621
- PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
-
XM_021470170.1 → XP_021325845.1 ligand of Numb protein X 2 isoform X2
- UniProtKB/TrEMBL
-
A0A8M9PXH3
- Conserved Domains (1) summary
-
- cd00992
Location:496 → 580
- PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
-
XM_021470171.1 → XP_021325846.1 ligand of Numb protein X 2 isoform X3
- UniProtKB/TrEMBL
-
A0A8M9PU28
- Conserved Domains (5) summary
-
- smart00228
Location:267 → 353
- PDZ; Domain present in PSD-95, Dlg, and ZO-1/2
- cd00992
Location:375 → 455
- PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
- cd16780
Location:44 → 88
- mRING-HC-C3HC3D_LNX2; Modified RING finger, HC subclass (C3HC3D-type), found in ligand of numb protein X 2 (LNX2)
- cl00117
Location:515 → 565
- PDZ; PDZ domain, also called DHR (Dlg homologous region) or GLGF (after a conserved sequence motif). Many PDZ domains bind C-terminal polypeptides, though binding to internal (non-C-terminal) polypeptides and even to lipids has been demonstrated. ...
- cl26688
Location:44 → 201
- DWNN; DWNN domain
Reference GRCz11 ALT_DRER_TU_1
Genomic
-
NW_018395171.1 Reference GRCz11 ALT_DRER_TU_1
- Range
-
316958..344056 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)