ankrd16 ankyrin repeat domain 16 [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: ankrd16provided by ZNC
Official Full Name: ankyrin repeat domain 16provided by ZNC
Primary source: ZFIN:ZDB-GENE-041210-253
See related: Ensembl:ENSDARG00000003822 AllianceGenome:ZFIN:ZDB-GENE-041210-253
Gene type: protein coding
RefSeq status: VALIDATED
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as: zgc:110558; si:dkey-108d22.7
Summary: Orthologous to human ANKRD16 (ankyrin repeat domain 16). [provided by Alliance of Genome Resources, Apr 2022]
Orthologs: human mouse all
NEW: Try the new Gene table
Try the new Transcript table

Genomic context

Location:: chromosome: 4

Exon count:: 7

Annotation release	Status	Assembly	Chr	Location
106	current	GRCz11 (GCF_000002035.6)	4	NC_007115.7 (11458099..11462702)
105	previous assembly	GRCz10 (GCF_000002035.5)	4	NC_007115.6 (11459250..11463853)

Chromosome 4 - NC_007115.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to reference sequence details

Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Expression

Go to the top of the page Help

See details

Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
BioProject: PRJEB1986
Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

Go to the top of the page Help

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Submit: New GeneRIF Correction

General gene information

Go to the top of the page Help

Gene Ontology Provided by ZFIN

Function	Evidence Code	Pubs
enables molecular_function	ND No biological Data available more info

Process	Evidence Code	Pubs
involved_in biological_process	ND No biological Data available more info

Component	Evidence Code	Pubs
is_active_in cellular_component	ND No biological Data available more info

General protein information

Go to the top of the page Help

Preferred Names: ankyrin repeat domain-containing protein 16

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001017563.2 → NP_001017563.2 ankyrin repeat domain-containing protein 16

Status: VALIDATED

Source sequence(s)

BX469931, CF997117, CT648269, EB843335

UniProtKB/TrEMBL

A0A8M1N596, Q1LX89

Related

ENSDARP00000029899.6, ENSDART00000037600.7

Conserved Domains (4) summary

cd00204
Location:43 → 165

ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...

pfam12796
Location:49 → 142

Ank_2; Ankyrin repeats (3 copies)

pfam13637
Location:9 → 65

Ank_4; Ankyrin repeats (many copies)

sd00045
Location:44 → 76

ANK; ANK repeat [structural motif]