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LOC542221 sulfite reductase1 [ Zea mays ]

Gene ID: 542221, updated on 14-Dec-2023

Summary

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Gene symbol
LOC542221
Gene description
sulfite reductase1
Locus tag
ZEAMMB73_Zm00001d038625
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Zea mays
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
Also known as
sir; ZmSiR; cl122_1; GRMZM2G090338
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Genomic context

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See LOC542221 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
8
Annotation release Status Assembly Chr Location
103 current Zm-B73-REFERENCE-NAM-5.0 (GCF_902167145.1) 6 NC_050101.1 (168474739..168479526, complement)
102.20200423 previous assembly B73 RefGen_v4 (GCF_000005005.2) 6 NC_024464.2 (161162646..161167433, complement)

Chromosome 6 - NC_050101.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC100284626 Neighboring gene serine/arginine repetitive matrix protein 1 Neighboring gene uncharacterized LOC100278642 Neighboring gene uncharacterized LOC100383743

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Intercellular Localization of Assimilatory Sulfate Reduction in Leaves of Zea mays and Triticum aestivum. Schmutz D, et al. Plant Physiol, 1984 Apr. PMID 16663524, Free PMC Article
  2. NMR study of the electron transfer complex of plant ferredoxin and sulfite reductase: mapping the interaction sites of ferredoxin. Saitoh T, et al. J Biol Chem, 2006 Apr 14. PMID 16469743
  3. Chemical modification studies of tryptophan, arginine and lysine residues in maize chloroplast ferredoxin:sulfite oxidoreductase. Hirasawa M, et al. Photosynth Res, 2005 Dec. PMID 16307304
  4. Oxidation-reduction properties of maize ferredoxin: sulfite oxidoreductase. Hirasawa M, et al. Biochim Biophys Acta, 2004 Feb 15. PMID 14871491
  5. The 70-kDa major DNA-compacting protein of the chloroplast nucleoid is sulfite reductase. Sato N, et al. FEBS Lett, 2001 Jan 5. PMID 11163356

See all (10) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 4 iron, 4 sulfur cluster binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables heme binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables sulfite reductase (ferredoxin) activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables sulfite reductase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in sulfate assimilation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in chloroplast stroma IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of sulfite reductase complex (NADPH) IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
sulfite reductase [ferredoxin], chloroplastic
Names
Sulfite reductase [ferredoxin], chloroplastic
cl122_1(519)
NP_001105302.2

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001111832.2 → NP_001105302.2  sulfite reductase [ferredoxin], chloroplastic

    Status: VALIDATED

    Source sequence(s)
    BG550492, CABHLF010000009, CB833622, EC893109, EE044072, EE168499, FL037603
    UniProtKB/TrEMBL
    A0A1D6M7L9, A0A3L6E5T4
    Conserved Domains (1) summary
    PLN00178
    Location:15 → 635
    PLN00178; sulfite reductase

RefSeqs of Annotated Genomes: Zea mays Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Zm-B73-REFERENCE-NAM-5.0 Primary Assembly

Genomic

  1. NC_050101.1 Reference Zm-B73-REFERENCE-NAM-5.0 Primary Assembly

    Range
    168474739..168479526 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
O23813.1 GenPept UniProtKB/Swiss-Prot:O23813

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials