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The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCz11 Primary Assembly
Genomic
-
NC_007114.7 Reference GRCz11 Primary Assembly
- Range
-
60044422..60056506
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_017354852.2 → XP_017210341.1 uncharacterized protein zgc:113265 isoform X1
- UniProtKB/TrEMBL
-
A0A8M6Z5T1
- Conserved Domains (5) summary
-
- cd01644
Location:971 → 1191
- RT_pepA17; RT_pepA17: Reverse transcriptase (RTs) in retrotransposons. This subfamily represents the RT domain of a multifunctional enzyme. C-terminal to the RT domain is a domain homologous to aspartic proteinases (corresponding to Merops family A17) encoded by ...
- pfam03564
Location:342 → 461
- DUF1759; Protein of unknown function (DUF1759)
- pfam05380
Location:1205 → 1365
- Peptidase_A17; Pao retrotransposon peptidase
- pfam16515
Location:29 → 110
- HIP1_clath_bdg; Clathrin-binding domain of Huntingtin-interacting protein 1
- cl21549
Location:1694 → 1786
- rve; Integrase core domain
-
XM_017354851.2 → XP_017210340.1 uncharacterized protein zgc:113265 isoform X1
- UniProtKB/TrEMBL
-
A0A8M6Z5T1
- Conserved Domains (5) summary
-
- cd01644
Location:971 → 1191
- RT_pepA17; RT_pepA17: Reverse transcriptase (RTs) in retrotransposons. This subfamily represents the RT domain of a multifunctional enzyme. C-terminal to the RT domain is a domain homologous to aspartic proteinases (corresponding to Merops family A17) encoded by ...
- pfam03564
Location:342 → 461
- DUF1759; Protein of unknown function (DUF1759)
- pfam05380
Location:1205 → 1365
- Peptidase_A17; Pao retrotransposon peptidase
- pfam16515
Location:29 → 110
- HIP1_clath_bdg; Clathrin-binding domain of Huntingtin-interacting protein 1
- cl21549
Location:1694 → 1786
- rve; Integrase core domain
-
XM_021474766.1 → XP_021330441.1 gastrula zinc finger protein XlCGF8.2DB isoform X2
- UniProtKB/TrEMBL
-
A0A8M9Q5L1
- Conserved Domains (2) summary
-
- COG5048
Location:34 → 312
- COG5048; FOG: Zn-finger [General function prediction only]
- sd00017
Location:38 → 58
- ZF_C2H2; C2H2 Zn finger [structural motif]
The following Reference Sequences have been suppressed. Explain
These RefSeqs were suppressed for the
cited reason(s). Suppressed RefSeqs do not appear in BLAST databases, related
sequence links, or BLAST links (BLink), but may still be retrieved by clicking on
their accession.version below.
-
NM_001014311.1: Suppressed sequence
- Description
- NM_001014311.1: This RefSeq was suppressed temporarily based on the calculation that the encoded protein was shorter than proteins from the putative ortholog from human: ZNF808 (GeneID:388558).