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ANKLE1 ankyrin repeat and LEM domain containing 1 [ Bos taurus (cattle) ]

Gene ID: 537502, updated on 5-Mar-2024

Summary

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Official Symbol
ANKLE1provided by VGNC
Official Full Name
ankyrin repeat and LEM domain containing 1provided by VGNC
Primary source
VGNC:VGNC:25903
See related
BGD:BT16707; Ensembl:ENSBTAG00000012592
Gene type
protein coding
RefSeq status
MODEL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Also known as
ANKRD41
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 7
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 7 NC_037334.1 (5831255..5836531, complement)

Chromosome 7 - NC_037334.1Genomic Context describing neighboring genes Neighboring gene mitochondrial ribosomal protein L34 Neighboring gene abhydrolase domain containing 8 Neighboring gene BRISC and BRCA1 A complex member 1 Neighboring gene USH1 protein network component harmonin binding protein 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_037334.1 Chromosome 7 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables endonuclease activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ankyrin repeat and LEM domain-containing protein 1
Names
ankyrin repeat domain 41

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037334.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    5831255..5836531 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005208558.5 → XP_005208615.1  ankyrin repeat and LEM domain-containing protein 1

    See identical proteins and their annotated locations for XP_005208615.1

    UniProtKB/TrEMBL
    F1MUZ6
    Related
    ENSBTAP00000016715.6, ENSBTAT00000016715.7
    Conserved Domains (4) summary
    cd10454
    Location:509 → 621
    GIY-YIG_COG3680_Meta; GIY-YIG domain of hypothetical proteins from Metazoa
    cd00204
    Location:71 → 185
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    sd00045
    Location:132 → 163
    ANK; ANK repeat [structural motif]
    cl02649
    Location:420 → 457
    LEM; LEM (Lap2/Emerin/Man1) domain found in emerin, lamina-associated polypeptide 2 (LAP2), inner nuclear membrane protein Man1 and similar proteins
Nucleotide Protein Strain
Heading Accession and Version

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