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ATXN7 ataxin 7 [ Bos taurus (cattle) ]

Gene ID: 536833, updated on 5-Mar-2024

Summary

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Official Symbol
ATXN7provided by VGNC
Official Full Name
ataxin 7provided by VGNC
Primary source
VGNC:VGNC:26342
See related
BGD:BT11157; Ensembl:ENSBTAG00000011287
Gene type
protein coding
RefSeq status
MODEL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 22
Exon count:
20
Annotation release Status Assembly Chr Location
RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 22 NC_037349.1 (37436456..37604398, complement)

Chromosome 22 - NC_037349.1Genomic Context describing neighboring genes Neighboring gene prickle planar cell polarity protein 2 Neighboring gene transfer RNA cysteine (anticodon GCA) Neighboring gene proteasome 26S subunit, non-ATPase 6 Neighboring gene chromosome 22 C3orf49 homolog Neighboring gene THO complex subunit 7 Neighboring gene sentan, cilia apical structure protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_037349.1 Chromosome 22 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
ataxin-7
Names
ataxin-7 pseudogene

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037349.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    37436456..37604398 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_059880155.1 → XP_059736138.1  ataxin-7 isoform X1

  2. XM_059880157.1 → XP_059736140.1  ataxin-7 isoform X3

  3. XM_024983197.2 → XP_024838965.1  ataxin-7 isoform X2

    UniProtKB/TrEMBL
    F1N112
    Related
    ENSBTAP00000014996.6, ENSBTAT00000014996.7
    Conserved Domains (2) summary
    pfam08313
    Location:323 → 383
    SCA7; zinc-binding domain
    cl26464
    Location:362 → 478
    Atrophin-1; Atrophin-1 family

  4. XM_059880150.1 → XP_059736133.1  ataxin-7 isoform X1

  5. XM_059880149.1 → XP_059736132.1  ataxin-7 isoform X1

  6. XM_059880156.1 → XP_059736139.1  ataxin-7 isoform X1

  7. XM_059880147.1 → XP_059736130.1  ataxin-7 isoform X1

  8. XM_059880153.1 → XP_059736136.1  ataxin-7 isoform X1

  9. XM_024983192.2 → XP_024838960.1  ataxin-7 isoform X1

    Conserved Domains (2) summary
    pfam08313
    Location:323 → 383
    SCA7; zinc-binding domain
    cl26464
    Location:362 → 478
    Atrophin-1; Atrophin-1 family

  10. XM_059880154.1 → XP_059736137.1  ataxin-7 isoform X1

    Related
    ENSBTAP00000093090.1, ENSBTAT00000087570.1

  11. XM_059880148.1 → XP_059736131.1  ataxin-7 isoform X1

  12. XM_059880152.1 → XP_059736135.1  ataxin-7 isoform X1

  13. XM_059880151.1 → XP_059736134.1  ataxin-7 isoform X1

  14. XM_005222693.5 → XP_005222750.1  ataxin-7 isoform X4

    See identical proteins and their annotated locations for XP_005222750.1

    UniProtKB/TrEMBL
    A0A3Q1M960
    Related
    ENSBTAP00000070486.1, ENSBTAT00000085416.2
    Conserved Domains (2) summary
    pfam08313
    Location:188 → 248
    SCA7; SCA7, zinc-binding domain
    cl26464
    Location:227 → 343
    Atrophin-1; Atrophin-1 family
Nucleotide Protein Strain
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