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ARMC9 armadillo repeat containing 9 [ Bos taurus (cattle) ]

Gene ID: 536462, updated on 3-Apr-2024

Summary

Official Symbol
ARMC9provided by VGNC
Official Full Name
armadillo repeat containing 9provided by VGNC
Primary source
VGNC:VGNC:26163
See related
BGD:BT24667; Ensembl:ENSBTAG00000018502
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
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Genomic context

Location:
chromosome: 2
Exon count:
25
Annotation release Status Assembly Chr Location
RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 2 NC_037329.1 (118967316..119146148)

Chromosome 2 - NC_037329.1Genomic Context describing neighboring genes Neighboring gene chromosome 2 C2orf72 homolog Neighboring gene proteasome 26S subunit, non-ATPase 1 Neighboring gene 5-hydroxytryptamine receptor 2B Neighboring gene U6 spliceosomal RNA Neighboring gene U6 spliceosomal RNA Neighboring gene transfer RNA glycine (anticodon CCC) Neighboring gene protein arginine N-methyltransferase 1-like Neighboring gene UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7 Neighboring gene transfer RNA glycine (anticodon UCC)

Genomic regions, transcripts, and products

Genomic Sequence:
NC_037329.1 Chromosome 2 Reference ARS-UCD2.0 Primary Assembly

General gene information

Clone Names

  • MGC137336

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
PubMed 
Process Evidence Code Pubs
involved_in cilium assembly IEA
Inferred from Electronic Annotation
more info
PubMed 
Component Evidence Code Pubs
located_in centriole IEA
Inferred from Electronic Annotation
more info
PubMed 
located_in ciliary basal body IEA
Inferred from Electronic Annotation
more info
PubMed 
located_in ciliary tip IEA
Inferred from Electronic Annotation
more info
PubMed 

General protein information

Preferred Names
lisH domain-containing protein ARMC9

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001046418.2NP_001039883.1  lisH domain-containing protein ARMC9

    See identical proteins and their annotated locations for NP_001039883.1

    Status: PROVISIONAL

    Source sequence(s)
    BC112726
    UniProtKB/Swiss-Prot
    Q2KI89
    UniProtKB/TrEMBL
    A0A452DIV5
    Related
    ENSBTAP00000024631.7, ENSBTAT00000024631.7

RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037329.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    118967316..119146148
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005202963.5XP_005203020.1  lisH domain-containing protein ARMC9 isoform X1

    See identical proteins and their annotated locations for XP_005203020.1

    UniProtKB/TrEMBL
    A0A3Q1LU58, A0A3Q1MFN9
    Conserved Domains (2) summary
    smart00667
    Location:738
    LisH; Lissencephaly type-1-like homology motif
    cd00020
    Location:413526
    ARM; Armadillo/beta-catenin-like repeats. An approximately 40 amino acid long tandemly repeated sequence motif first identified in the Drosophila segment polarity gene armadillo; these repeats were also found in the mammalian armadillo homolog beta-catenin, ...
  2. XM_005202964.5XP_005203021.1  lisH domain-containing protein ARMC9 isoform X1

    See identical proteins and their annotated locations for XP_005203021.1

    UniProtKB/TrEMBL
    A0A3Q1LU58, A0A3Q1MFN9
    Conserved Domains (2) summary
    smart00667
    Location:738
    LisH; Lissencephaly type-1-like homology motif
    cd00020
    Location:413526
    ARM; Armadillo/beta-catenin-like repeats. An approximately 40 amino acid long tandemly repeated sequence motif first identified in the Drosophila segment polarity gene armadillo; these repeats were also found in the mammalian armadillo homolog beta-catenin, ...
  3. XM_005202962.4XP_005203019.1  lisH domain-containing protein ARMC9 isoform X1

    See identical proteins and their annotated locations for XP_005203019.1

    UniProtKB/TrEMBL
    A0A3Q1LU58, A0A3Q1MFN9
    Related
    ENSBTAP00000073031.1, ENSBTAT00000079273.2
    Conserved Domains (2) summary
    smart00667
    Location:738
    LisH; Lissencephaly type-1-like homology motif
    cd00020
    Location:413526
    ARM; Armadillo/beta-catenin-like repeats. An approximately 40 amino acid long tandemly repeated sequence motif first identified in the Drosophila segment polarity gene armadillo; these repeats were also found in the mammalian armadillo homolog beta-catenin, ...
  4. XM_015459574.3XP_015315060.1  lisH domain-containing protein ARMC9 isoform X2

    UniProtKB/TrEMBL
    A0A452DIV5
    Conserved Domains (2) summary
    smart00667
    Location:738
    LisH; Lissencephaly type-1-like homology motif
    cd00020
    Location:413526
    ARM; Armadillo/beta-catenin-like repeats. An approximately 40 amino acid long tandemly repeated sequence motif first identified in the Drosophila segment polarity gene armadillo; these repeats were also found in the mammalian armadillo homolog beta-catenin, ...
  5. XM_059875635.1XP_059731618.1  lisH domain-containing protein ARMC9 isoform X3

    Related
    ENSBTAP00000084450.1, ENSBTAT00000134965.1