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ANKS1A ankyrin repeat and sterile alpha motif domain containing 1A [ Bos taurus (cattle) ]

Gene ID: 532631, updated on 3-Apr-2024

Summary

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Official Symbol
ANKS1Aprovided by VGNC
Official Full Name
ankyrin repeat and sterile alpha motif domain containing 1Aprovided by VGNC
Primary source
VGNC:VGNC:25944
See related
BGD:BT18070; Ensembl:ENSBTAG00000016890
Gene type
protein coding
RefSeq status
MODEL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 23
Exon count:
26
Annotation release Status Assembly Chr Location
RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 23 NC_037350.1 (8896321..9065273)

Chromosome 23 - NC_037350.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC112443807 Neighboring gene bridge-like lipid transfer protein family member 3A Neighboring gene TATA-box binding protein associated factor 11 Neighboring gene t-complex 11 Neighboring gene uncharacterized LOC132343669 Neighboring gene signal peptide, CUB domain and EGF like domain containing 3

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_037350.1 Chromosome 23 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ankyrin repeat and SAM domain-containing protein 1A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037350.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    8896321..9065273
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005223297.5 → XP_005223354.1  ankyrin repeat and SAM domain-containing protein 1A isoform X1

    See identical proteins and their annotated locations for XP_005223354.1

    UniProtKB/TrEMBL
    A0A3Q1MKP8
    Conserved Domains (7) summary
    cd09499
    Location:722 → 788
    SAM_AIDA1AB-like_repeat1; SAM domain of AIDA1AB-like proteins, repeat 1
    cd09500
    Location:793 → 857
    SAM_AIDA1AB-like_repeat2; SAM domain of AIDA1AB-like proteins, repeat 2
    smart00454
    Location:725 → 784
    SAM; Sterile alpha motif
    cd00204
    Location:78 → 227
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    cd01274
    Location:951 → 1096
    PTB_Anks; Ankyrin repeat and sterile alpha motif (SAM) domain-containing (Anks) protein family Phosphotyrosine-binding (PTB) domain
    pfam12796
    Location:211 → 302
    Ank_2; Ankyrin repeats (3 copies)
    sd00045
    Location:173 → 204
    ANK; ANK repeat [structural motif]

  2. XM_005223298.4 → XP_005223355.1  ankyrin repeat and SAM domain-containing protein 1A isoform X2

    See identical proteins and their annotated locations for XP_005223355.1

    UniProtKB/TrEMBL
    A0A3Q1MKP8, A0A3Q1MSQ6
    Related
    ENSBTAP00000073147.1, ENSBTAT00000086941.2
    Conserved Domains (7) summary
    cd09499
    Location:722 → 788
    SAM_AIDA1AB-like_repeat1; SAM domain of AIDA1AB-like proteins, repeat 1
    cd09500
    Location:793 → 857
    SAM_AIDA1AB-like_repeat2; SAM domain of AIDA1AB-like proteins, repeat 2
    smart00454
    Location:725 → 784
    SAM; Sterile alpha motif
    cd00204
    Location:78 → 227
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    cd01274
    Location:951 → 1096
    PTB_Anks; Ankyrin repeat and sterile alpha motif (SAM) domain-containing (Anks) protein family Phosphotyrosine-binding (PTB) domain
    pfam12796
    Location:211 → 302
    Ank_2; Ankyrin repeats (3 copies)
    sd00045
    Location:173 → 204
    ANK; ANK repeat [structural motif]

  3. XM_005223300.5 → XP_005223357.1  ankyrin repeat and SAM domain-containing protein 1A isoform X4

    See identical proteins and their annotated locations for XP_005223357.1

    UniProtKB/TrEMBL
    A0A3Q1MKP8
    Conserved Domains (7) summary
    cd09499
    Location:722 → 788
    SAM_AIDA1AB-like_repeat1; SAM domain of AIDA1AB-like proteins, repeat 1
    cd09500
    Location:793 → 857
    SAM_AIDA1AB-like_repeat2; SAM domain of AIDA1AB-like proteins, repeat 2
    smart00454
    Location:725 → 784
    SAM; Sterile alpha motif
    cd00204
    Location:78 → 227
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    cd01274
    Location:951 → 1096
    PTB_Anks; Ankyrin repeat and sterile alpha motif (SAM) domain-containing (Anks) protein family Phosphotyrosine-binding (PTB) domain
    pfam12796
    Location:211 → 302
    Ank_2; Ankyrin repeats (3 copies)
    sd00045
    Location:173 → 204
    ANK; ANK repeat [structural motif]

  4. XM_005223301.5 → XP_005223358.1  ankyrin repeat and SAM domain-containing protein 1A isoform X5

    See identical proteins and their annotated locations for XP_005223358.1

    UniProtKB/TrEMBL
    A0A3Q1MKP8, F1MHL2
    Related
    ENSBTAP00000036035.5, ENSBTAT00000036172.6
    Conserved Domains (7) summary
    cd09499
    Location:722 → 788
    SAM_AIDA1AB-like_repeat1; SAM domain of AIDA1AB-like proteins, repeat 1
    cd09500
    Location:793 → 857
    SAM_AIDA1AB-like_repeat2; SAM domain of AIDA1AB-like proteins, repeat 2
    smart00454
    Location:725 → 784
    SAM; Sterile alpha motif
    cd00204
    Location:78 → 227
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    cd01274
    Location:951 → 1096
    PTB_Anks; Ankyrin repeat and sterile alpha motif (SAM) domain-containing (Anks) protein family Phosphotyrosine-binding (PTB) domain
    pfam12796
    Location:211 → 302
    Ank_2; Ankyrin repeats (3 copies)
    sd00045
    Location:173 → 204
    ANK; ANK repeat [structural motif]

  5. XM_005223299.4 → XP_005223356.1  ankyrin repeat and SAM domain-containing protein 1A isoform X3

    See identical proteins and their annotated locations for XP_005223356.1

    UniProtKB/TrEMBL
    A0A3Q1MKP8
    Conserved Domains (7) summary
    cd09499
    Location:701 → 767
    SAM_AIDA1AB-like_repeat1; SAM domain of AIDA1AB-like proteins, repeat 1
    cd09500
    Location:772 → 836
    SAM_AIDA1AB-like_repeat2; SAM domain of AIDA1AB-like proteins, repeat 2
    smart00454
    Location:704 → 763
    SAM; Sterile alpha motif
    cd00204
    Location:78 → 206
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    cd01274
    Location:930 → 1075
    PTB_Anks; Ankyrin repeat and sterile alpha motif (SAM) domain-containing (Anks) protein family Phosphotyrosine-binding (PTB) domain
    pfam12796
    Location:88 → 183
    Ank_2; Ankyrin repeats (3 copies)
    sd00045
    Location:84 → 114
    ANK; ANK repeat [structural motif]

  6. XM_002697185.7 → XP_002697231.3  ankyrin repeat and SAM domain-containing protein 1A isoform X7

    See identical proteins and their annotated locations for XP_002697231.3

    UniProtKB/TrEMBL
    A0A3Q1MKP8
    Conserved Domains (7) summary
    cd09499
    Location:701 → 767
    SAM_AIDA1AB-like_repeat1; SAM domain of AIDA1AB-like proteins, repeat 1
    cd09500
    Location:772 → 836
    SAM_AIDA1AB-like_repeat2; SAM domain of AIDA1AB-like proteins, repeat 2
    smart00454
    Location:704 → 763
    SAM; Sterile alpha motif
    cd00204
    Location:78 → 206
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    cd01274
    Location:930 → 1075
    PTB_Anks; Ankyrin repeat and sterile alpha motif (SAM) domain-containing (Anks) protein family Phosphotyrosine-binding (PTB) domain
    pfam12796
    Location:88 → 183
    Ank_2; Ankyrin repeats (3 copies)
    sd00045
    Location:84 → 114
    ANK; ANK repeat [structural motif]

  7. XM_024983955.2 → XP_024839723.1  ankyrin repeat and SAM domain-containing protein 1A isoform X8

    UniProtKB/TrEMBL
    A0A3Q1MKP8
    Conserved Domains (7) summary
    cd09499
    Location:701 → 767
    SAM_AIDA1AB-like_repeat1; SAM domain of AIDA1AB-like proteins, repeat 1
    cd09500
    Location:772 → 836
    SAM_AIDA1AB-like_repeat2; SAM domain of AIDA1AB-like proteins, repeat 2
    cd00204
    Location:78 → 206
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    cd01274
    Location:930 → 1075
    PTB_Anks; Ankyrin repeat and sterile alpha motif (SAM) domain-containing (Anks) protein family Phosphotyrosine-binding (PTB) domain
    sd00045
    Location:84 → 114
    ANK; ANK repeat [structural motif]
    pfam02161
    Location:474 → 612
    Prog_receptor; Progesterone receptor
    pfam12796
    Location:255 → 294
    Ank_2; Ankyrin repeats (3 copies)

  8. XM_059880710.1 → XP_059736693.1  ankyrin repeat and SAM domain-containing protein 1A isoform X6

  9. XM_059880711.1 → XP_059736694.1  ankyrin repeat and SAM domain-containing protein 1A isoform X9

Nucleotide Protein Strain
Heading Accession and Version

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