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Rnf24 ring finger protein 24 [ Mus musculus (house mouse) ]

Gene ID: 51902, updated on 5-Mar-2024

Summary

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Official Symbol
Rnf24provided by MGI
Official Full Name
ring finger protein 24provided by MGI
Primary source
MGI:MGI:1261771
See related
Ensembl:ENSMUSG00000048911 AllianceGenome:MGI:1261771
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
D2Ertd504e; 2810473M14Rik; 4930505A13Rik
Summary
Predicted to enable ubiquitin protein ligase activity. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in Golgi apparatus. Is expressed in early conceptus and genitourinary system. Orthologous to human RNF24 (ring finger protein 24). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Broad expression in testis adult (RPKM 10.0), whole brain E14.5 (RPKM 9.9) and 25 other tissues See more
Orthologs
human all
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Genomic context

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See Rnf24 in Genome Data Viewer
Location:
2 F1; 2 63.32 cM
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 2 NC_000068.8 (131139984..131194766, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 2 NC_000068.7 (131298488..131352892, complement)

Chromosome 2 - NC_000068.8Genomic Context describing neighboring genes Neighboring gene STARR-positive B cell enhancer ABC_E4499 Neighboring gene mitochondrial antiviral signaling protein Neighboring gene STARR-positive B cell enhancer ABC_E5984 Neighboring gene STARR-seq mESC enhancer starr_05706 Neighboring gene STARR-seq mESC enhancer starr_05707 Neighboring gene pantothenate kinase 2 Neighboring gene microRNA 103-2 Neighboring gene small nuclear ribonucleoprotein E, pseudogene Neighboring gene predicted gene, 30590 Neighboring gene STARR-seq mESC enhancer starr_05709 Neighboring gene aldo-keto reductase family 1 member A1-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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Related articles in PubMed

  1. ELAC2 Functions as a Key Gene in the Early Development of Placental Formation Based on WGCNA. Liang J, et al. Cells, 2023 Feb 14. PMID 36831280, Free PMC Article
  2. Identification of novel oocyte and granulosa cell markers. Malcuit C, et al. Gene Expr Patterns, 2009 Sep. PMID 19539053
  3. Characterization of an exchangeable gene trap using pU-17 carrying a stop codon-beta geo cassette. Taniwaki T, et al. Dev Growth Differ, 2005 Apr. PMID 15840001
  4. Exchangeable gene trap using the Cre/mutated lox system. Araki K, et al. Cell Mol Biol (Noisy-le-grand), 1999 Jul. PMID 10512203
  5. BioID screening of biotinylation sites using the avidin-like protein Tamavidin 2-REV identifies global interactors of stimulator of interferon genes (STING). Motani K, et al. J Biol Chem, 2020 Aug 7. PMID 32554809, Free PMC Article

See all (24) citations in PubMed

GeneRIFs: Gene References Into Functions

Variation

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Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Endonuclease-mediated (2) 

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
  
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in Golgi apparatus ISO
Inferred from Sequence Orthology
more info
  
located_in membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
RING finger protein 24

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_178607.5 → NP_848722.1  RING finger protein 24

    See identical proteins and their annotated locations for NP_848722.1

    Status: VALIDATED

    Source sequence(s)
    AL808128
    Consensus CDS
    CCDS16762.1
    UniProtKB/Swiss-Prot
    Q8BGI1
    UniProtKB/TrEMBL
    Q4VA59
    Related
    ENSMUSP00000058630.5, ENSMUST00000059372.11
    Conserved Domains (1) summary
    cd16469
    Location:76 → 122
    RING-H2_RNF24_like; RING finger, H2 subclass, found in RING finger proteins RNF24, RNF122, and similar proteins

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000068.8 Reference GRCm39 C57BL/6J

    Range
    131139984..131194766 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q8BGI1.1 GenPept UniProtKB/Swiss-Prot:Q8BGI1

Gene LinkOut

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