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AFMID arylformamidase [ Bos taurus (cattle) ]

Gene ID: 518864, updated on 5-Mar-2024

Summary

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Official Symbol
AFMIDprovided by VGNC
Official Full Name
arylformamidaseprovided by VGNC
Primary source
VGNC:VGNC:25716
See related
BGD:BT13878; Ensembl:ENSBTAG00000007125
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 19
Exon count:
12
Annotation release Status Assembly Chr Location
RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 19 NC_037346.1 (53953566..53977501, complement)

Chromosome 19 - NC_037346.1Genomic Context describing neighboring genes Neighboring gene transmembrane protein 235 Neighboring gene baculoviral IAP repeat containing 5 Neighboring gene large ribosomal subunit protein uL16-like Neighboring gene thymidine kinase 1 Neighboring gene synaptogyrin 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_037346.1 Chromosome 19 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables arylformamidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in tryptophan catabolic process to kynurenine IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
kynurenine formamidase
NP_001179431.1
XP_010814846.1
XP_010814847.1
XP_024835907.1
XP_059734038.1
XP_059734039.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001192502.1 → NP_001179431.1  kynurenine formamidase

    See identical proteins and their annotated locations for NP_001179431.1

    Status: PROVISIONAL

    Source sequence(s)
    NKLS02000019
    UniProtKB/TrEMBL
    E1BLL5
    Related
    ENSBTAP00000048024.4, ENSBTAT00000051898.4
    Conserved Domains (2) summary
    COG0657
    Location:12 → 280
    Aes; Acetyl esterase/lipase [Lipid transport and metabolism]
    cl21494
    Location:90 → 280
    Abhydrolase; alpha/beta hydrolases

RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037346.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    53953566..53977501 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_059878055.1 → XP_059734038.1  kynurenine formamidase isoform X4

    Related
    ENSBTAP00000097159.1, ENSBTAT00000122961.1

  2. XM_059878056.1 → XP_059734039.1  kynurenine formamidase isoform X5

  3. XM_010816544.4 → XP_010814846.1  kynurenine formamidase isoform X1

    Conserved Domains (2) summary
    COG0657
    Location:21 → 320
    Aes; Acetyl esterase/lipase [Lipid transport and metabolism]
    cl21494
    Location:99 → 320
    Abhydrolase; alpha/beta hydrolases

  4. XM_024980139.2 → XP_024835907.1  kynurenine formamidase isoform X2

    Related
    ENSBTAP00000098773.1, ENSBTAT00000097396.1
    Conserved Domains (1) summary
    COG0657
    Location:21 → 320
    Aes; Acetyl esterase/lipase [Lipid transport and metabolism]

  5. XM_010816545.4 → XP_010814847.1  kynurenine formamidase isoform X3

    Conserved Domains (1) summary
    cl21494
    Location:133 → 256
    Abhydrolase; alpha/beta hydrolases

RNA

  1. XR_009491529.1 RNA Sequence

Nucleotide Protein Strain
Heading Accession and Version

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