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CUL5 cullin 5 [ Canis lupus familiaris (dog) ]

Gene ID: 489422, updated on 5-Mar-2024

Summary

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Official Symbol
CUL5provided by VGNC
Official Full Name
cullin 5provided by VGNC
Primary source
VGNC:VGNC:39733
See related
Ensembl:ENSCAFG00845003623
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
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Genomic context

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See CUL5 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
19
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 5 NC_051809.1 (24422828..24518010, complement)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 5 NC_006587.4 (24319399..24414613, complement)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 5 NC_049226.1 (24429854..24525492, complement)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 5 NC_049265.1 (24470110..24565387, complement)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 5 NC_049746.1 (24371684..24467023, complement)

Chromosome 5 - NC_051809.1Genomic Context describing neighboring genes Neighboring gene nuclear protein, coactivator of histone transcription Neighboring gene uncharacterized LOC111096101 Neighboring gene acetyl-CoA acetyltransferase 1 Neighboring gene uncharacterized LOC102156093 Neighboring gene 60S ribosomal protein L22-like Neighboring gene malate dehydrogenase, mitochondrial-like Neighboring gene RAB39A, member RAS oncogene family Neighboring gene 40S ribosomal protein S6-like Neighboring gene solute carrier family 35 member F2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ubiquitin protein ligase binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in SCF-dependent proteasomal ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein ubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of Cul5-RING ubiquitin ligase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of SCF ubiquitin ligase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cullin-5; LOW QUALITY PROTEIN: cullin-5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051809.1 Reference ROS_Cfam_1.0

    Range
    24422828..24518010 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038665013.1 → XP_038520941.1  LOW QUALITY PROTEIN: cullin-5

    UniProtKB/TrEMBL
    A0A8C0K4I2
    Related
    ENSCAFP00845005142.1, ENSCAFT00845006463.1
    Conserved Domains (2) summary
    pfam00888
    Location:96 → 749
    Cullin; Cullin family
    pfam10557
    Location:788 → 848
    Cullin_Nedd8; Cullin protein neddylation domain

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049265.1 Alternate UMICH_Zoey_3.1

    Range
    24470110..24565387 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038475155.1 → XP_038331083.1  LOW QUALITY PROTEIN: cullin-5

    Conserved Domains (2) summary
    pfam00888
    Location:96 → 749
    Cullin; Cullin family
    pfam10557
    Location:788 → 848
    Cullin_Nedd8; Cullin protein neddylation domain

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049746.1 Alternate UNSW_CanFamBas_1.0

    Range
    24371684..24467023 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038600485.1 → XP_038456413.1  LOW QUALITY PROTEIN: cullin-5

    Conserved Domains (2) summary
    pfam00888
    Location:96 → 749
    Cullin; Cullin family
    pfam10557
    Location:788 → 848
    Cullin_Nedd8; Cullin protein neddylation domain

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049226.1 Alternate UU_Cfam_GSD_1.0

    Range
    24429854..24525492 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038536286.1 → XP_038392214.1  LOW QUALITY PROTEIN: cullin-5

    UniProtKB/TrEMBL
    A0A8C0K4I2
    Conserved Domains (2) summary
    pfam00888
    Location:96 → 749
    Cullin; Cullin family
    pfam10557
    Location:788 → 848
    Cullin_Nedd8; Cullin protein neddylation domain

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006587.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    24319399..24414613 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038511705.1 → XP_038367633.1  LOW QUALITY PROTEIN: cullin-5

    UniProtKB/TrEMBL
    A0A8C0K4I2
    Conserved Domains (2) summary
    pfam00888
    Location:96 → 749
    Cullin; Cullin family
    pfam10557
    Location:788 → 848
    Cullin_Nedd8; Cullin protein neddylation domain
Nucleotide Protein
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