ANAPC4 anaphase promoting complex subunit 4 [Canis lupus familiaris (dog)] - Gene

Summary

Official Symbol: ANAPC4provided by VGNC
Official Full Name: anaphase promoting complex subunit 4provided by VGNC
Primary source: VGNC:VGNC:37850
See related: Ensembl:ENSCAFG00845007014
Gene type: protein coding
RefSeq status: MODEL
Organism: Canis lupus familiaris (sub-species: familiaris)
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 3

Exon count:: 28

Annotation release	Status	Assembly	Chr	Location
106	current	ROS_Cfam_1.0 (GCF_014441545.1)	3	NC_051807.1 (85851958..85888197, complement)
106	current	Dog10K_Boxer_Tasha (GCF_000002285.5)	3	NC_006585.4 (87391671..87427899, complement)
106	current	UU_Cfam_GSD_1.0 (GCF_011100685.1)	3	NC_049224.1 (85476904..85513179, complement)
106	current	UMICH_Zoey_3.1 (GCF_005444595.1)	3	NC_049263.1 (84985804..85022014, complement)
106	current	UNSW_CanFamBas_1.0 (GCF_013276365.1)	3	NC_049744.1 (85091368..85127587, complement)

Chromosome 3 - NC_051807.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Homology

NCBI Orthologs

Orthologs from OrthoDB

Gene Ontology Provided by RefSeq

Function	Evidence Code	Pubs
enables protein binding	IEA Inferred from Electronic Annotation more info	PubMed

Process	Evidence Code	Pubs
involved_in anaphase-promoting complex-dependent catabolic process	IEA Inferred from Electronic Annotation more info	PubMed
involved_in positive regulation of mitotic metaphase/anaphase transition	IEA Inferred from Electronic Annotation more info	PubMed
involved_in protein K11-linked ubiquitination	IEA Inferred from Electronic Annotation more info	PubMed

Component	Evidence Code	Pubs
part_of anaphase-promoting complex	IEA Inferred from Electronic Annotation more info	PubMed
located_in nuclear periphery	IEA Inferred from Electronic Annotation more info	PubMed

General protein information

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Preferred Names: anaphase-promoting complex subunit 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

NC_051807.1 Reference ROS_Cfam_1.0

Range

85851958..85888197 complement

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_038662054.1 → XP_038517982.1 anaphase-promoting complex subunit 4

UniProtKB/TrEMBL

A0A8C0LS39, A0A8C0PUM0, A0A8I3N4R7

Related

ENSCAFP00845009747.1, ENSCAFT00845012478.1

Conserved Domains (3) summary

sd00039
Location:24 → 59

7WD40; WD40 repeat [structural motif]

pfam12894
Location:26 → 118

ANAPC4_WD40; Anaphase-promoting complex subunit 4 WD40 domain

pfam12896
Location:232 → 431

ANAPC4; Anaphase-promoting complex, cyclosome, subunit 4

Alternate UMICH_Zoey_3.1

Genomic

NC_049263.1 Alternate UMICH_Zoey_3.1

Range

84985804..85022014 complement

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_038472564.1 → XP_038328492.1 anaphase-promoting complex subunit 4

Conserved Domains (3) summary

sd00039
Location:24 → 59

7WD40; WD40 repeat [structural motif]

pfam12894
Location:26 → 118

ANAPC4_WD40; Anaphase-promoting complex subunit 4 WD40 domain

pfam12896
Location:232 → 431

ANAPC4; Anaphase-promoting complex, cyclosome, subunit 4

Alternate UNSW_CanFamBas_1.0

Genomic

NC_049744.1 Alternate UNSW_CanFamBas_1.0

Range

85091368..85127587 complement

Download

GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_038597835.1 → XP_038453763.1 anaphase-promoting complex subunit 4

Conserved Domains (3) summary

sd00039
Location:24 → 59

7WD40; WD40 repeat [structural motif]

pfam12894
Location:26 → 118

ANAPC4_WD40; Anaphase-promoting complex subunit 4 WD40 domain

pfam12896
Location:232 → 431

ANAPC4; Anaphase-promoting complex, cyclosome, subunit 4

Alternate UU_Cfam_GSD_1.0

Genomic

NC_049224.1 Alternate UU_Cfam_GSD_1.0

Range

85476904..85513179 complement

Download

GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_038533555.1 → XP_038389483.1 anaphase-promoting complex subunit 4

UniProtKB/TrEMBL

A0A8C0LS39, A0A8C0PUM0, A0A8I3N4R7

Conserved Domains (3) summary

sd00039
Location:24 → 59

7WD40; WD40 repeat [structural motif]

pfam12894
Location:26 → 118

ANAPC4_WD40; Anaphase-promoting complex subunit 4 WD40 domain

pfam12896
Location:232 → 431

ANAPC4; Anaphase-promoting complex, cyclosome, subunit 4

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

NC_006585.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

Range

87391671..87427899 complement

Download

GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_536270.6 → XP_536270.4 anaphase-promoting complex subunit 4

UniProtKB/TrEMBL

A0A8C0LS39, A0A8C0PUM0, A0A8I3N4R7

Conserved Domains (3) summary

sd00039
Location:24 → 59

7WD40; WD40 repeat [structural motif]

pfam12894
Location:26 → 118

ANAPC4_WD40; Anaphase-promoting complex subunit 4 WD40 domain

pfam12896
Location:232 → 431

ANAPC4; Anaphase-promoting complex, cyclosome, subunit 4