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ACSS1 acyl-CoA synthetase short chain family member 1 [ Canis lupus familiaris (dog) ]

Gene ID: 477002, updated on 5-Mar-2024

Summary

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Official Symbol
ACSS1provided by VGNC
Official Full Name
acyl-CoA synthetase short chain family member 1provided by VGNC
Primary source
VGNC:VGNC:52863
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 23
Exon count:
14
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 23 NC_051827.1 (1435773..1494208, complement)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 23 NC_006605.4 (1222892..1281311, complement)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 23 NC_049244.1 (1364196..1422653, complement)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 23 NC_049283.1 (1251020..1309471, complement)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 23 NC_049764.1 (1381192..1439604, complement)

Chromosome 23 - NC_051827.1Genomic Context describing neighboring genes Neighboring gene cystatin F Neighboring gene U6 spliceosomal RNA Neighboring gene adipocyte plasma membrane associated protein Neighboring gene uncharacterized LOC102156733 Neighboring gene 40S ribosomal protein S25-like Neighboring gene uncharacterized LOC119865333 Neighboring gene visual system homeobox 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables AMP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables acetate-CoA ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in acetyl-CoA biosynthetic process from acetate IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
acetyl-coenzyme A synthetase 2-like, mitochondrial
XP_038287594.1
XP_038362933.1
XP_038426147.1
XP_038490326.1
XP_534200.4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051827.1 Reference ROS_Cfam_1.0

    Range
    1435773..1494208 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038431666.1 → XP_038287594.1  acetyl-coenzyme A synthetase 2-like, mitochondrial

    UniProtKB/TrEMBL
    A0A8C0K005
    Conserved Domains (1) summary
    TIGR02188
    Location:43 → 668
    Ac_CoA_lig_AcsA; acetate--CoA ligase

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049283.1 Alternate UMICH_Zoey_3.1

    Range
    1251020..1309471 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038507005.1 → XP_038362933.1  acetyl-coenzyme A synthetase 2-like, mitochondrial

    Conserved Domains (1) summary
    TIGR02188
    Location:43 → 668
    Ac_CoA_lig_AcsA; acetate--CoA ligase

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049764.1 Alternate UNSW_CanFamBas_1.0

    Range
    1381192..1439604 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038634398.1 → XP_038490326.1  acetyl-coenzyme A synthetase 2-like, mitochondrial

    Conserved Domains (1) summary
    TIGR02188
    Location:43 → 668
    Ac_CoA_lig_AcsA; acetate--CoA ligase

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049244.1 Alternate UU_Cfam_GSD_1.0

    Range
    1364196..1422653 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038570219.1 → XP_038426147.1  acetyl-coenzyme A synthetase 2-like, mitochondrial

    UniProtKB/TrEMBL
    A0A8C0K005
    Conserved Domains (1) summary
    TIGR02188
    Location:43 → 668
    Ac_CoA_lig_AcsA; acetate--CoA ligase

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006605.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    1222892..1281311 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_534200.6 → XP_534200.4  acetyl-coenzyme A synthetase 2-like, mitochondrial

    UniProtKB/TrEMBL
    A0A8C0K005
    Conserved Domains (1) summary
    TIGR02188
    Location:43 → 668
    Ac_CoA_lig_AcsA; acetate--CoA ligase
Nucleotide Protein
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