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ATP6V1C1 ATPase H+ transporting V1 subunit C1 [ Canis lupus familiaris (dog) ]

Gene ID: 475061, updated on 5-Mar-2024

Summary

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Official Symbol
ATP6V1C1provided by VGNC
Official Full Name
ATPase H+ transporting V1 subunit C1provided by VGNC
Primary source
VGNC:VGNC:38278
See related
Ensembl:ENSCAFG00845008268
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 13
Exon count:
17
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 13 NC_051817.1 (4672415..4733419)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 13 NC_006595.4 (4513182..4573038)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 13 NC_049234.1 (4644765..4704650)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 13 NC_049273.1 (4514303..4574155)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 13 NC_049754.1 (4631627..4691637)

Chromosome 13 - NC_051817.1Genomic Context describing neighboring genes Neighboring gene antizyme inhibitor 1 Neighboring gene histone deacetylase complex subunit SAP18 pseudogene Neighboring gene uncharacterized LOC111098506 Neighboring gene BAALC binder of MAP3K1 and KLF4 Neighboring gene 40S ribosomal protein S29-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables proton-transporting ATPase activity, rotational mechanism IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in proton transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in lysosomal membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of vacuolar proton-transporting V-type ATPase, V1 domain IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
V-type proton ATPase subunit C 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051817.1 Reference ROS_Cfam_1.0

    Range
    4672415..4733419
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038684766.1 → XP_038540694.1  V-type proton ATPase subunit C 1 isoform X1

    UniProtKB/TrEMBL
    A0A8C0JNI1, A0A8C0Q6W5, A0A8I3NAS2, A0A8P0PE06
    Conserved Domains (2) summary
    cd14785
    Location:56 → 76
    V-ATPase_C; 3-helical coiled coil [structural motif]
    pfam03223
    Location:5 → 370
    V-ATPase_C; V-ATPase subunit C

  2. XM_038684764.1 → XP_038540692.1  V-type proton ATPase subunit C 1 isoform X1

    UniProtKB/TrEMBL
    A0A8C0JNI1, A0A8C0Q6W5, A0A8I3NAS2, A0A8P0PE06
    Related
    ENSCAFP00845011362.1, ENSCAFT00845014667.1
    Conserved Domains (2) summary
    cd14785
    Location:56 → 76
    V-ATPase_C; 3-helical coiled coil [structural motif]
    pfam03223
    Location:5 → 370
    V-ATPase_C; V-ATPase subunit C

  3. XM_038684767.1 → XP_038540695.1  V-type proton ATPase subunit C 1 isoform X2

    UniProtKB/TrEMBL
    A0A8C0PB23, A0A8I3N328, A0A8P0PE06
    Related
    ENSCAFP00845011284.1, ENSCAFT00845014566.1
    Conserved Domains (2) summary
    cd14785
    Location:56 → 76
    V-ATPase_C; 3-helical coiled coil [structural motif]
    pfam03223
    Location:5 → 370
    V-ATPase_C; V-ATPase subunit C

  4. XM_038684765.1 → XP_038540693.1  V-type proton ATPase subunit C 1 isoform X1

    UniProtKB/TrEMBL
    A0A8C0JNI1, A0A8C0Q6W5, A0A8I3NAS2, A0A8P0PE06
    Conserved Domains (2) summary
    cd14785
    Location:56 → 76
    V-ATPase_C; 3-helical coiled coil [structural motif]
    pfam03223
    Location:5 → 370
    V-ATPase_C; V-ATPase subunit C

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049273.1 Alternate UMICH_Zoey_3.1

    Range
    4514303..4574155
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038492992.1 → XP_038348920.1  V-type proton ATPase subunit C 1 isoform X1

    Conserved Domains (2) summary
    cd14785
    Location:56 → 76
    V-ATPase_C; 3-helical coiled coil [structural motif]
    pfam03223
    Location:5 → 370
    V-ATPase_C; V-ATPase subunit C

  2. XM_038492990.1 → XP_038348918.1  V-type proton ATPase subunit C 1 isoform X1

    Conserved Domains (2) summary
    cd14785
    Location:56 → 76
    V-ATPase_C; 3-helical coiled coil [structural motif]
    pfam03223
    Location:5 → 370
    V-ATPase_C; V-ATPase subunit C

  3. XM_038492993.1 → XP_038348921.1  V-type proton ATPase subunit C 1 isoform X2

    Conserved Domains (2) summary
    cd14785
    Location:56 → 76
    V-ATPase_C; 3-helical coiled coil [structural motif]
    pfam03223
    Location:5 → 370
    V-ATPase_C; V-ATPase subunit C

  4. XM_038492991.1 → XP_038348919.1  V-type proton ATPase subunit C 1 isoform X1

    Conserved Domains (2) summary
    cd14785
    Location:56 → 76
    V-ATPase_C; 3-helical coiled coil [structural motif]
    pfam03223
    Location:5 → 370
    V-ATPase_C; V-ATPase subunit C

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049754.1 Alternate UNSW_CanFamBas_1.0

    Range
    4631627..4691637
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038619149.1 → XP_038475077.1  V-type proton ATPase subunit C 1 isoform X1

    Conserved Domains (2) summary
    cd14785
    Location:56 → 76
    V-ATPase_C; 3-helical coiled coil [structural motif]
    pfam03223
    Location:5 → 370
    V-ATPase_C; V-ATPase subunit C

  2. XM_038619147.1 → XP_038475075.1  V-type proton ATPase subunit C 1 isoform X1

    Conserved Domains (2) summary
    cd14785
    Location:56 → 76
    V-ATPase_C; 3-helical coiled coil [structural motif]
    pfam03223
    Location:5 → 370
    V-ATPase_C; V-ATPase subunit C

  3. XM_038619150.1 → XP_038475078.1  V-type proton ATPase subunit C 1 isoform X2

    Conserved Domains (2) summary
    cd14785
    Location:56 → 76
    V-ATPase_C; 3-helical coiled coil [structural motif]
    pfam03223
    Location:5 → 370
    V-ATPase_C; V-ATPase subunit C

  4. XM_038619148.1 → XP_038475076.1  V-type proton ATPase subunit C 1 isoform X1

    Conserved Domains (2) summary
    cd14785
    Location:56 → 76
    V-ATPase_C; 3-helical coiled coil [structural motif]
    pfam03223
    Location:5 → 370
    V-ATPase_C; V-ATPase subunit C

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049234.1 Alternate UU_Cfam_GSD_1.0

    Range
    4644765..4704650
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038555253.1 → XP_038411181.1  V-type proton ATPase subunit C 1 isoform X1

    UniProtKB/TrEMBL
    A0A8C0JNI1, A0A8C0Q6W5, A0A8I3NAS2, A0A8P0PE06
    Conserved Domains (2) summary
    cd14785
    Location:56 → 76
    V-ATPase_C; 3-helical coiled coil [structural motif]
    pfam03223
    Location:5 → 370
    V-ATPase_C; V-ATPase subunit C

  2. XM_038555251.1 → XP_038411179.1  V-type proton ATPase subunit C 1 isoform X1

    UniProtKB/TrEMBL
    A0A8C0JNI1, A0A8C0Q6W5, A0A8I3NAS2, A0A8P0PE06
    Conserved Domains (2) summary
    cd14785
    Location:56 → 76
    V-ATPase_C; 3-helical coiled coil [structural motif]
    pfam03223
    Location:5 → 370
    V-ATPase_C; V-ATPase subunit C

  3. XM_038555254.1 → XP_038411182.1  V-type proton ATPase subunit C 1 isoform X2

    UniProtKB/TrEMBL
    A0A8C0PB23, A0A8I3N328, A0A8P0PE06
    Conserved Domains (2) summary
    cd14785
    Location:56 → 76
    V-ATPase_C; 3-helical coiled coil [structural motif]
    pfam03223
    Location:5 → 370
    V-ATPase_C; V-ATPase subunit C

  4. XM_038555252.1 → XP_038411180.1  V-type proton ATPase subunit C 1 isoform X1

    UniProtKB/TrEMBL
    A0A8C0JNI1, A0A8C0Q6W5, A0A8I3NAS2, A0A8P0PE06
    Conserved Domains (2) summary
    cd14785
    Location:56 → 76
    V-ATPase_C; 3-helical coiled coil [structural motif]
    pfam03223
    Location:5 → 370
    V-ATPase_C; V-ATPase subunit C

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006595.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    4513182..4573038
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022426602.2 → XP_022282310.1  V-type proton ATPase subunit C 1 isoform X1

    UniProtKB/TrEMBL
    A0A8C0JNI1, A0A8C0Q6W5, A0A8I3NAS2, A0A8P0PE06
    Conserved Domains (2) summary
    cd14785
    Location:56 → 76
    V-ATPase_C; 3-helical coiled coil [structural motif]
    pfam03223
    Location:5 → 370
    V-ATPase_C; V-ATPase subunit C

  2. XM_022426601.2 → XP_022282309.1  V-type proton ATPase subunit C 1 isoform X1

    UniProtKB/TrEMBL
    A0A8C0JNI1, A0A8C0Q6W5, A0A8I3NAS2, A0A8P0PE06
    Conserved Domains (2) summary
    cd14785
    Location:56 → 76
    V-ATPase_C; 3-helical coiled coil [structural motif]
    pfam03223
    Location:5 → 370
    V-ATPase_C; V-ATPase subunit C

  3. XM_022426603.2 → XP_022282311.1  V-type proton ATPase subunit C 1 isoform X2

    UniProtKB/TrEMBL
    A0A8C0PB23, A0A8I3N328, A0A8P0PE06
    Conserved Domains (2) summary
    cd14785
    Location:56 → 76
    V-ATPase_C; 3-helical coiled coil [structural motif]
    pfam03223
    Location:5 → 370
    V-ATPase_C; V-ATPase subunit C

  4. XM_038424571.1 → XP_038280499.1  V-type proton ATPase subunit C 1 isoform X1

    UniProtKB/TrEMBL
    A0A8C0JNI1, A0A8C0Q6W5, A0A8I3NAS2, A0A8P0PE06
    Conserved Domains (2) summary
    cd14785
    Location:56 → 76
    V-ATPase_C; 3-helical coiled coil [structural motif]
    pfam03223
    Location:5 → 370
    V-ATPase_C; V-ATPase subunit C
Nucleotide Protein
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