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ATXN10 ataxin 10 [ Canis lupus familiaris (dog) ]

Gene ID: 474467, updated on 5-Mar-2024

Summary

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Official Symbol
ATXN10provided by VGNC
Official Full Name
ataxin 10provided by VGNC
Primary source
VGNC:VGNC:38299
See related
Ensembl:ENSCAFG00845010727
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 10
Exon count:
14
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 10 NC_051814.1 (21011042..21175060, complement)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 10 NC_006592.4 (20199107..20362464, complement)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 10 NC_049231.1 (21224981..21388522, complement)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 10 NC_049270.1 (20730687..20894020, complement)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 10 NC_049751.1 (21044002..21207495, complement)

Chromosome 10 - NC_051814.1Genomic Context describing neighboring genes Neighboring gene Wnt family member 7B Neighboring gene uncharacterized LOC102152393 Neighboring gene basic proline-rich protein-like Neighboring gene fibulin 1 Neighboring gene RIB43A domain with coiled-coils 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in neuron projection development IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ataxin-10

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051814.1 Reference ROS_Cfam_1.0

    Range
    21011042..21175060 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038679553.1 → XP_038535481.1  ataxin-10 isoform X1

    UniProtKB/TrEMBL
    A0A8C0QY85, A0A8C0S1H3, A0A8C0YRB2, A0A8I3N5N3, A0A8I3NI83
    Related
    ENSCAFP00845014796.1, ENSCAFT00845018935.1
    Conserved Domains (1) summary
    pfam09759
    Location:370 → 467
    Atx10homo_assoc; Spinocerebellar ataxia type 10 protein domain

  2. XM_038679554.1 → XP_038535482.1  ataxin-10 isoform X2

    Conserved Domains (1) summary
    pfam09759
    Location:370 → 394
    Atx10homo_assoc; Spinocerebellar ataxia type 10 protein domain

  3. XM_038679555.1 → XP_038535483.1  ataxin-10 isoform X3

    UniProtKB/TrEMBL
    A0A8C0S1H3, A0A8I3N5N3
    Conserved Domains (1) summary
    pfam09759
    Location:370 → 392
    Atx10homo_assoc; Spinocerebellar ataxia type 10 protein domain

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049270.1 Alternate UMICH_Zoey_3.1

    Range
    20730687..20894020 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038488319.1 → XP_038344247.1  ataxin-10 isoform X1

    Conserved Domains (1) summary
    pfam09759
    Location:370 → 467
    Atx10homo_assoc; Spinocerebellar ataxia type 10 protein domain

  2. XM_038488320.1 → XP_038344248.1  ataxin-10 isoform X2

    Conserved Domains (1) summary
    pfam09759
    Location:370 → 394
    Atx10homo_assoc; Spinocerebellar ataxia type 10 protein domain

  3. XM_038488321.1 → XP_038344249.1  ataxin-10 isoform X3

    Conserved Domains (1) summary
    pfam09759
    Location:370 → 392
    Atx10homo_assoc; Spinocerebellar ataxia type 10 protein domain

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049751.1 Alternate UNSW_CanFamBas_1.0

    Range
    21044002..21207495 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038614209.1 → XP_038470137.1  ataxin-10 isoform X1

    Conserved Domains (1) summary
    pfam09759
    Location:370 → 467
    Atx10homo_assoc; Spinocerebellar ataxia type 10 protein domain

  2. XM_038614210.1 → XP_038470138.1  ataxin-10 isoform X2

    Conserved Domains (1) summary
    pfam09759
    Location:370 → 394
    Atx10homo_assoc; Spinocerebellar ataxia type 10 protein domain

  3. XM_038614211.1 → XP_038470139.1  ataxin-10 isoform X3

    Conserved Domains (1) summary
    pfam09759
    Location:370 → 392
    Atx10homo_assoc; Spinocerebellar ataxia type 10 protein domain

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049231.1 Alternate UU_Cfam_GSD_1.0

    Range
    21224981..21388522 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038550220.1 → XP_038406148.1  ataxin-10 isoform X1

    UniProtKB/TrEMBL
    A0A8C0QY85, A0A8C0S1H3, A0A8C0YRB2, A0A8I3N5N3, A0A8I3NI83
    Conserved Domains (1) summary
    pfam09759
    Location:370 → 467
    Atx10homo_assoc; Spinocerebellar ataxia type 10 protein domain

  2. XM_038550221.1 → XP_038406149.1  ataxin-10 isoform X2

    Conserved Domains (1) summary
    pfam09759
    Location:370 → 394
    Atx10homo_assoc; Spinocerebellar ataxia type 10 protein domain

  3. XM_038550222.1 → XP_038406150.1  ataxin-10 isoform X3

    UniProtKB/TrEMBL
    A0A8C0S1H3, A0A8I3N5N3
    Conserved Domains (1) summary
    pfam09759
    Location:370 → 392
    Atx10homo_assoc; Spinocerebellar ataxia type 10 protein domain

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006592.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    20199107..20362464 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_531697.7 → XP_531697.2  ataxin-10 isoform X1

    UniProtKB/TrEMBL
    A0A8C0QY85, A0A8C0S1H3, A0A8C0YRB2, A0A8I3N5N3, A0A8I3NI83
    Conserved Domains (1) summary
    pfam09759
    Location:370 → 467
    Atx10homo_assoc; Spinocerebellar ataxia type 10 protein domain

  2. XM_022424293.2 → XP_022280001.1  ataxin-10 isoform X2

    Conserved Domains (1) summary
    pfam09759
    Location:370 → 394
    Atx10homo_assoc; Spinocerebellar ataxia type 10 protein domain

  3. XM_005625753.4 → XP_005625810.1  ataxin-10 isoform X3

    UniProtKB/TrEMBL
    A0A8C0S1H3, A0A8I3N5N3
    Conserved Domains (1) summary
    pfam09759
    Location:370 → 392
    Atx10homo_assoc; Spinocerebellar ataxia type 10 protein domain
Nucleotide Protein
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