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ATP6V1B1 ATPase H+ transporting V1 subunit B1 [ Pan troglodytes (chimpanzee) ]

Gene ID: 470401, updated on 29-Mar-2024

Summary

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Official Symbol
ATP6V1B1provided by VGNC
Official Full Name
ATPase H+ transporting V1 subunit B1provided by VGNC
Primary source
VGNC:VGNC:10563
Locus tag
CK820_G0035600
See related
Ensembl:ENSPTRG00000012038
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 2A
Exon count:
14
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 12 NC_072410.2 (51758543..51788061, complement)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 2A NC_072399.1 (71065172..71094691)

Chromosome 12 - NC_072410.2Genomic Context describing neighboring genes Neighboring gene testis expressed 261 Neighboring gene ankyrin repeat domain 53 Neighboring gene elongin-C-like Neighboring gene small nucleolar RNA U13 Neighboring gene ventral anterior homeobox 2 Neighboring gene uncharacterized LOC134807765

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables proton-transporting ATPase activity, rotational mechanism IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in ATP metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in proton transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in vacuolar acidification IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of proton-transporting V-type ATPase, V1 domain IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
V-type proton ATPase subunit B, kidney isoform
Names
ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B1 (Renal tubular acidosis with deafness)
XP_001145161.2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_072410.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    51758543..51788061 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001145161.6 → XP_001145161.2  V-type proton ATPase subunit B, kidney isoform

    UniProtKB/TrEMBL
    A0A2J8KUJ6, A0A2J8KUK5, A0A6D2WUF2, H2QI31
    Related
    ENSPTRP00000020664.6
    Conserved Domains (1) summary
    TIGR01040
    Location:40 → 503
    V-ATPase_V1_B; V-type (H+)-ATPase V1, B subunit
Nucleotide Protein
Heading Accession and Version

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